ncRNA ID | novel_gma_miR9001 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:11865908-11866042 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UUUAAAAUCGAUGUUGUAAGUG - 22 |
Stem-loop(if miRNA) |
--UUU              -   UG    A        A                A     -----    A      AAAAUCGAUGUUGU AAG  CUUA CAACAUCG UUUUCAAAUAACCGAU UUGAA     ACUA A      |||||||||||||| |||  |||| |||||||| |||||||||||||||| |||||     ||||      UUUUGGCUACAGCA UUC  GAAU GUUGUAGC AAAAGUUUAUUGGCUA AAUUU     UGAU U UAAAC              A   GU    -        C                C     UAGUG    U |
Stem-loop sequence | UUUAAAAUCGAUGUUGUAAGUGCUUAACAACAUCGAUUUUCAAAUAACCGAUAUUGAAACUAAAUUUAGUGUGAUUUUAACAUCGGUUAUUUGAAAACCGAUGUUGUAAGUGCUUAACGACAUCGGUUUUCAAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014776578.1 |
|
1.5 | PREDICTED: Glycine max ankyrin repeat and SOCS box protein 7-like (LOC100786031), transcript variant X1, mRNA | ankyrin repeat and SOCS box protein 7-like(LOC100786031) | coding protein | psRNATarget |