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BaseInfo

ncRNA ID novel_gma_miR8998
Species Glycine max
Class miRNA
Genome position Chr7:10252988-10253068 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 1 - GAGGUCGUGAUAUUGUAUAAUUCA - 24
Stem-loop(if miRNA) --     --    A    G          GA   --GUG UUA
  GAGGU  CGUG UAUU UAUAAUUCAU  GCA     C   U
  |||||  |||| |||| ||||||||||  |||     |
  UUCCG  GUAU AUAA GUGUUAAGUA  UGU     G   A
AG     UU    A    G          -G   AUAAA UAA
Stem-loop sequence GAGGUCGUGAUAUUGUAUAAUUCAUGAGCAGUGCUUAUAAAUGAAAUAUGUGAUGAAUUGUGGAAUAAUAUGUUGCCUUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006576790.2
ncRNA:24   ACU-UAAUAUGUUAUAGUGCUGGAG   1
  |||-|*|||*||||||=||||||||
targets:744   UGAUAGUAUUCAAUAUUACGACCUC   768

2.5 PREDICTED: Glycine max uncharacterized LOC102668008 (LOC102668008), mRNA uncharacterized LOC102668008(LOC102668008) coding protein psRNATarget