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BaseInfo

ncRNA ID novel_gma_miR8994
Species Glycine max
Class miRNA
Genome position Chr7:9169657-9169785 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 1 - UAACCGUUGUUGAAAUUAGACCUU - 24
Stem-loop(if miRNA) ----UAAC  U         U G     --C      A  ACUAUC   -AC          A  AUU
        CG UGUUGAAAU A ACCUU   UACAUC GU      CUG   CACCGAUGUA AA   A
        || ||||||||| | |||||   |||||| ||      |||   |||||||||| ||
        GC ACAAUUUUG U UGGAA   AUGUAG CA      GAU   GUGGCUACAU UU   G
GUAUUCGU  U         - G     AAA      -  AAUACU   GUU          C  CCA
Stem-loop sequence UAACCGUUGUUGAAAUUAGACCUUCUACAUCAGUACUAUCCUGACCACCGAUGUAAAAAUUAGACCUUCUACAUCGGUGUUGUAGUCAUAAACGAUGUAAAAAAGGUGUGUUUUAACAUCGUGCUUAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT097173.1
ncRNA:24   UUCCAGA-UUAAAGUUGUUGCCAAU   1
  ***||=|-|||||||||||||||||
targets:43   CUUGUUUCAAUUUCAACAACGGUUA   67

3.0 Soybean clone JCVI-FLGm-15P4 unknown mRNA NA coding protein psRNATarget
AK245711.1
ncRNA:24   UUCCAGA-UUAAAGUUGUUGCCAAU   1
  ***||=|-|||||||||||||||||
targets:42   CUUGUUUCAAUUUCAACAACGGUUA   66

3.0 Glycine max cDNA, clone: GMFL01-39-D24 NA coding protein psRNATarget
XM_003536080.3
ncRNA:24   UUCCAGA-UUAAAGUUGUUGCCAAU   1
  ***||=|-|||||||||||||||||
targets:51   CUUGUUUCAAUUUCAACAACGGUUA   75

3.0 PREDICTED: Glycine max histone H1-like (LOC100785055), mRNA histone H1-like(LOC100785055) coding protein psRNATarget