ncRNA ID | novel_gma_miR8994 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:9169657-9169785 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAACCGUUGUUGAAAUUAGACCUU - 24 |
Stem-loop(if miRNA) |
----UAAC  U         U G     --C      A  ACUAUC   -AC          A  AUU         CG UGUUGAAAU A ACCUU   UACAUC GU      CUG   CACCGAUGUA AA   A         || ||||||||| | |||||   |||||| ||      |||   |||||||||| ||         GC ACAAUUUUG U UGGAA   AUGUAG CA      GAU   GUGGCUACAU UU   G GUAUUCGU  U         - G     AAA      -  AAUACU   GUU          C  CCA |
Stem-loop sequence | UAACCGUUGUUGAAAUUAGACCUUCUACAUCAGUACUAUCCUGACCACCGAUGUAAAAAUUAGACCUUCUACAUCGGUGUUGUAGUCAUAAACGAUGUAAAAAAGGUGUGUUUUAACAUCGUGCUUAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT097173.1 |
|
3.0 | Soybean clone JCVI-FLGm-15P4 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
AK245711.1 |
|
3.0 | Glycine max cDNA, clone: GMFL01-39-D24 | NA | coding protein | psRNATarget | |||||||||
XM_003536080.3 |
|
3.0 | PREDICTED: Glycine max histone H1-like (LOC100785055), mRNA | histone H1-like(LOC100785055) | coding protein | psRNATarget |