ncRNA ID | novel_gma_miR8980 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:12453447-12453641 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUAAUUAUAGAGACUAAAAGAUUC - 24 |
Stem-loop(if miRNA) |
--CC        UC                A          G AUGAA    CC          C      G      C A     -AUUC       A     CUUUUAGU  UUAUAGUUAAUAAGUG AUUUUUUAGU C     GUUU  AUUUUAAUUC CAAAAG UCUUUG C UUAAA     UUUAACU A     ||||||||  |||||||||||||||| |||||||||| |     ||||  |||||||||| |||||| |||||| | |||||     ||||||| C     GAAAAUCA  GAUAUUAAUUAUUCAU UAAAAAAUCA G     UAAA  UAAAAUUAAG GUUUUC AGGAAU G AAUUU     AAAUUGA A CUUA        GA                C          G ---GA    UA          A      G      A C     AAAAA       G |
Stem-loop sequence | CCCUUUUAGUUCUUAUAGUUAAUAAGUGAAUUUUUUAGUGCAUGAAGUUUCCAUUUUAAUUCCCAAAAGGUCUUUGCCAUUAAAAUUCUUUAACUAACAGAGUUAAAAAAAAUUUAACGAUAAGGAGCUUUUGAGAAUUAAAAUAUAAAUAGGGACUAAAAAAUCUACUUAUUAAUUAUAGAGACUAAAAGAUUC |