ncRNA ID | novel_gma_miR8974 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:44559397-44559563 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 22 |
Mature sequence(if miRNA) | 1 - AGGGACUAAAAUGAAUAAGUUU - 22 |
Stem-loop(if miRNA) |
--      C              UAGUUAAUAU  AG          CCCUAAAA              C    --   AUUUCUGCCG   AUUUAU CAUUUUAGUCCCUA          GU  AUUUUUUAGU        UUUACAUUUUAAUU UCAA  UAG          U   |||||| ||||||||||||||          ||  ||||||||||        |||||||||||||| ||||  |||          U   UGAAUA GUAAAAUCAGGGAU          CA  UAAAAAAUCA        AAAUGUAAAAUUAA AGUU  CAA          A UU      A              ----------  CU          AGAACUUC              A    CU   UUUUUUUUAA |
Stem-loop sequence | AUUUAUCCAUUUUAGUCCCUAUAGUUAAUAUGUAGAUUUUUUAGUCCCUAAAAUUUACAUUUUAAUUCUCAAUAGAUUUCUGCCGUUAAAUUUUUUUUAACUCUUGAAAAUUAAAAUGUAAACUUCAAGAACUAAAAAAUUCACUAGGGACUAAAAUGAAUAAGUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK285576.1 |
|
2.0 | Glycine max cDNA, clone: GMFL01-12-O06 | NA | coding protein | psRNATarget | |||||||||
XM_006594681.2 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC100799062 (LOC100799062), mRNA | uncharacterized LOC100799062(LOC100799062) | coding protein | psRNATarget | |||||||||
XM_003540429.3 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC100800452 (LOC100800452), mRNA | uncharacterized LOC100800452(LOC100800452) | coding protein | psRNATarget |