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BaseInfo

ncRNA ID novel_gma_miR8973
Species Glycine max
Class miRNA
Genome position Chr7:38818649-38818737 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 66 - UUCUAAGACGGUUAUCUGAAAACC - 89
Stem-loop(if miRNA) --      A  -             --     AAA   UUU   UUUU
  UUUUCA GA AACCGUCUUAGAA  UCUUC   UUU   AAC    U
  |||||| || |||||||||||||  |||||   |||   |||
  AAAAGU CU UUGGCAGAAUCUU  AGAAG   AAA   UUG    U
CC      -  A             AC     ---   UUU   UUUU
Stem-loop sequence UUUUCAAGAAACCGUCUUAGAAUCUUCAAAUUUUUUAACUUUUUUUUUUGUUUUUAAAGAAGACAUUCUAAGACGGUUAUCUGAAAACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014763138.1
ncRNA:24   CCAAAAGUCUAUUGGCAGAAUCUU   1
  |*||||=|||*|||||||||||||
targets:1424   GUUUUUUAGAGAACCGUCUUAGAA   1447

2.0 PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X3, mRNA uncharacterized LOC100806242(LOC100806242) coding protein psRNATarget
XM_006589010.2
ncRNA:24   CCAAAAGUCUAUUGGCAGAAUCUU   1
  |*||||=|||*|||||||||||||
targets:2133   GUUUUUUAGAGAACCGUCUUAGAA   2156

2.0 PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X2, mRNA uncharacterized LOC100806242(LOC100806242) coding protein psRNATarget
XM_014775518.1
ncRNA:24   CCAAAAGUCUAUUGGCAGAAUCUU   1
  |*||*|==*|||||||||||||||
targets:733   GAUUAUUGAAUAACCGUCUUAGAA   756

3.0 PREDICTED: Glycine max methylsterol monooxygenase 1-1-like (LOC100802435), mRNA methylsterol monooxygenase 1-1-like(LOC100802435) coding protein psRNATarget