ncRNA ID | novel_gma_miR8971 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:35785124-35785273 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 21 |
Mature sequence(if miRNA) | 130 - AUUAUACAUUAUAUUUAAGGC - 150 |
Stem-loop(if miRNA) |
--        C                     -        A        UCUUAAAUAAUAAA       U  -  U  UUA   UUUAAAUA AAUGUAUGAUUUUAAUUAAAA UUAAUAUA AAUAAAAA              AGUAUUU UU AG AA   C   |||||||| ||||||||||||||||||||| |||||||| ||||||||              ||||||| || || ||   GAAUUUAU UUACAUAUUAAAAUUAAUUUU AAUUAUAU UUAUUUUU              UUAUAAA AA UC UU   A CG        A                     U        A        --------------       C  C  U  UAC |
Stem-loop sequence | UUUAAAUACAAUGUAUGAUUUUAAUUAAAAUUAAUAUAAAAUAAAAAUCUUAAAUAAUAAAAGUAUUUUUUAGUAAUUACACAUUUUCUCAACAAAUAUUUUUUUAUUAUAUAUUAAUUUUUAAUUAAAAUUAUACAUUAUAUUUAAGGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003524919.3 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100792185 (LOC100792185), transcript variant X2, mRNA | uncharacterized LOC100792185(LOC100792185) | coding protein | psRNATarget | |||||||||
XM_006580112.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100792185 (LOC100792185), transcript variant X1, mRNA | uncharacterized LOC100792185(LOC100792185) | coding protein | psRNATarget |