ncRNA ID | novel_gma_miR8968 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:29362314-29362393 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUGUCAACUAGAUUUUCUUAGCC - 24 |
Stem-loop(if miRNA) |
--       A     UUU      CCAACACCG     G UU   AAUGUCA CUAGA   UCUUAG         GUUAG A  U   ||||||| |||||   ||||||         ||||| |   UUACAGU GAUCU   GGGAUC         CAAUC U  U AA       C     UUU      ----AGCUA     G UU |
Stem-loop sequence | AAUGUCAACUAGAUUUUCUUAGCCAACACCGGUUAGGAUUUUUUUGCUAACAUCGACUAGGGUUUUCUAGCUGACAUUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006584076.2 |
|
2.5 | PREDICTED: Glycine max type I inositol polyphosphate 5-phosphatase 12-like (LOC100817047), transcript variant X2, mRNA | type I inositol polyphosphate 5-phosphatase 12-like(LOC100817047) | coding protein | psRNATarget | |||||||||
XM_006584075.2 |
|
2.5 | PREDICTED: Glycine max type I inositol polyphosphate 5-phosphatase 12-like (LOC100817047), transcript variant X1, mRNA | type I inositol polyphosphate 5-phosphatase 12-like(LOC100817047) | coding protein | psRNATarget |