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BaseInfo

ncRNA ID novel_gma_miR8968
Species Glycine max
Class miRNA
Genome position Chr7:29362314-29362393 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 1 - AAUGUCAACUAGAUUUUCUUAGCC - 24
Stem-loop(if miRNA) --       A     UUU      CCAACACCG     G UU
  AAUGUCA CUAGA   UCUUAG         GUUAG A  U
  ||||||| |||||   ||||||         ||||| |
  UUACAGU GAUCU   GGGAUC         CAAUC U  U
AA       C     UUU      ----AGCUA     G UU
Stem-loop sequence AAUGUCAACUAGAUUUUCUUAGCCAACACCGGUUAGGAUUUUUUUGCUAACAUCGACUAGGGUUUUCUAGCUGACAUUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006584076.2
ncRNA:24   CCGAUUCUUUUAGAUCAACUGUAA   1
  ||=--=|||||||*||||||||||
targets:1345   GGU--GGAAAAUCGAGUUGACAUU   1366

2.5 PREDICTED: Glycine max type I inositol polyphosphate 5-phosphatase 12-like (LOC100817047), transcript variant X2, mRNA type I inositol polyphosphate 5-phosphatase 12-like(LOC100817047) coding protein psRNATarget
XM_006584075.2
ncRNA:24   CCGAUUCUUUUAGAUCAACUGUAA   1
  ||=--=|||||||*||||||||||
targets:1345   GGU--GGAAAAUCGAGUUGACAUU   1366

2.5 PREDICTED: Glycine max type I inositol polyphosphate 5-phosphatase 12-like (LOC100817047), transcript variant X1, mRNA type I inositol polyphosphate 5-phosphatase 12-like(LOC100817047) coding protein psRNATarget