ncRNA ID | novel_gma_miR8962 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:14742275-14742422 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621;SRR1294477 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUUGGUGUCUGCGGUUAGUCU - 21 |
Stem-loop(if miRNA) |
--        C   G        AA                G    CACUUU     ---U   UC        ACU   UUUGGUGU UGC GUUAGUCU  AUCCGUUAAGUAAUGA GUGA      GUUAG    UUG  ACAUUAUC   U   |||||||| ||| ||||||||  |||||||||||||||| ||||      |||||    |||  ||||||||   AAACCAUA ACG CAAUCAGA  UAGGUAAUUCAUUACU UAUU      CAAUU    AAC  UGUAGUAG   A GA        U   A        AC                G    ---AUU     GUAU   GA        CAA |
Stem-loop sequence | UUUGGUGUCUGCGGUUAGUCUAAAUCCGUUAAGUAAUGAGGUGACACUUUGUUAGUUUGUCACAUUAUCACUUAAACGAUGAUGUAGCAAUAUGUUAACUUAUUAUGUCAUUACUUAAUGGAUCAAGACUAACAGCAUAUACCAAAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006595740.2 |
|
2.5 | PREDICTED: Glycine max (R)-specific enoyl-CoA hydratase-like (LOC102666018), transcript variant X1, mRNA | (R)-specific enoyl-CoA hydratase-like(LOC102666018) | coding protein | psRNATarget |