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BaseInfo

ncRNA ID novel_gma_miR8962
Species Glycine max
Class miRNA
Genome position Chr7:14742275-14742422 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621;SRR1294477
Length 21
Mature sequence(if miRNA) 1 - UUUGGUGUCUGCGGUUAGUCU - 21
Stem-loop(if miRNA) --        C   G        AA                G    CACUUU     ---U   UC        ACU
  UUUGGUGU UGC GUUAGUCU  AUCCGUUAAGUAAUGA GUGA      GUUAG    UUG  ACAUUAUC   U
  |||||||| ||| ||||||||  |||||||||||||||| ||||      |||||    |||  ||||||||
  AAACCAUA ACG CAAUCAGA  UAGGUAAUUCAUUACU UAUU      CAAUU    AAC  UGUAGUAG   A
GA        U   A        AC                G    ---AUU     GUAU   GA        CAA
Stem-loop sequence UUUGGUGUCUGCGGUUAGUCUAAAUCCGUUAAGUAAUGAGGUGACACUUUGUUAGUUUGUCACAUUAUCACUUAAACGAUGAUGUAGCAAUAUGUUAACUUAUUAUGUCAUUACUUAAUGGAUCAAGACUAACAGCAUAUACCAAAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006595740.2
ncRNA:21   UCUGAUUGGCGUCUGUGGUUU   1
  =|||*|||*||||||||||||
targets:841   GGACAAACAGCAGACACCAAA   861

2.5 PREDICTED: Glycine max (R)-specific enoyl-CoA hydratase-like (LOC102666018), transcript variant X1, mRNA (R)-specific enoyl-CoA hydratase-like(LOC102666018) coding protein psRNATarget