ncRNA ID | novel_gma_miR8960 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr7:12948549-12948752 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AUAAGUGUAUGCAUGAUGAACCU - 23 |
Stem-loop(if miRNA) |
--              G      C    C    AU        A                U       C      A      -  U           C  U UA   AUAAGUGUAUGCAU AUGAAC UUGA AUCG  UUUCUAGU AAACUGAUGUUAAUGU AUAUAUU AUAUCG UUUUGU AG AAAACCGAUGU AA G  A   |||||||||||||| |||||| |||| ||||  |||||||| |||||||||||||||| ||||||| |||||| |||||| || ||||||||||| || |   UAUUCACAUACGUA UACUUG AACU UAGC  AAAGAUCA UUUGGCUACAAUUACA UAUAUAA UGUAGC AAAACG UC UUUUGGCUACA UU C  U UU              G      C    A    -C        C                U       U      C      A  -           A  - UA |
Stem-loop sequence | AUAAGUGUAUGCAUGAUGAACCUUGACAUCGAUUUUCUAGUAAAACUGAUGUUAAUGUUAUAUAUUCAUAUCGAUUUUGUAGUAAAACCGAUGUCAAUGUAAUAUCUUAACAUCGGUUUUCUAGCAAAACCGAUGUUAAUAUAUUACAUUAACAUCGGUUUCACUAGAAACCGAUAUCAACGUUCAUGAUGCAUACACUUAUUU |