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BaseInfo

ncRNA ID novel_gma_miR8960
Species Glycine max
Class miRNA
Genome position Chr7:12948549-12948752 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 23
Mature sequence(if miRNA) 1 - AUAAGUGUAUGCAUGAUGAACCU - 23
Stem-loop(if miRNA) --              G      C    C    AU        A                U       C      A      -  U           C  U UA
  AUAAGUGUAUGCAU AUGAAC UUGA AUCG  UUUCUAGU AAACUGAUGUUAAUGU AUAUAUU AUAUCG UUUUGU AG AAAACCGAUGU AA G  A
  |||||||||||||| |||||| |||| ||||  |||||||| |||||||||||||||| ||||||| |||||| |||||| || ||||||||||| || |
  UAUUCACAUACGUA UACUUG AACU UAGC  AAAGAUCA UUUGGCUACAAUUACA UAUAUAA UGUAGC AAAACG UC UUUUGGCUACA UU C  U
UU              G      C    A    -C        C                U       U      C      A  -           A  - UA
Stem-loop sequence AUAAGUGUAUGCAUGAUGAACCUUGACAUCGAUUUUCUAGUAAAACUGAUGUUAAUGUUAUAUAUUCAUAUCGAUUUUGUAGUAAAACCGAUGUCAAUGUAAUAUCUUAACAUCGGUUUUCUAGCAAAACCGAUGUUAAUAUAUUACAUUAACAUCGGUUUCACUAGAAACCGAUAUCAACGUUCAUGAUGCAUACACUUAUUU