ncRNA ID | novel_gma_miR8957 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr11:14280000-14280143 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AACAUCGGUUAUCUGUAGAUAAUC - 24 |
Stem-loop(if miRNA) |
--         -CA         --C    UG   C  A            -     A            CG A   UUAUUUACA   AACCGAUGU   GAUA  AAC UU ACAUCGGUUGUA AUAGA AACCGAUGUUAA  U U   |||||||||   |||||||||   ||||  ||| || |||||||||||| ||||| ||||||||||||  |   AAUAGAUGU   UUGGCUACA   UUAU  UUG GA UGUAGCCAAUAU UGUUU UUGGCUACAAUU  A G CU         CUA         AUU    GU   C  C            G     A            AU U |
Stem-loop sequence | UUAUUUACACAAACCGAUGUCGAUAUGAACCUUAACAUCGGUUGUAAUAGAAAACCGAUGUUAACGUAUGUAUAUUAACAUCGGUUAUUUGUGUAUAACCGAUGUCAGCGUUUGUAUUUUAACAUCGGUUAUCUGUAGAUAAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006599122.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100814948 (LOC100814948), transcript variant X2, mRNA | uncharacterized LOC100814948(LOC100814948) | coding protein | psRNATarget | |||||||||
XM_014768845.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100814948 (LOC100814948), transcript variant X1, mRNA | uncharacterized LOC100814948(LOC100814948) | coding protein | psRNATarget |