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BaseInfo

ncRNA ID novel_gma_miR8957
Species Glycine max
Class miRNA
Genome position Chr11:14280000-14280143 [-]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 1 - AACAUCGGUUAUCUGUAGAUAAUC - 24
Stem-loop(if miRNA) --         -CA         --C    UG   C  A            -     A            CG A
  UUAUUUACA   AACCGAUGU   GAUA  AAC UU ACAUCGGUUGUA AUAGA AACCGAUGUUAA  U U
  |||||||||   |||||||||   ||||  ||| || |||||||||||| ||||| ||||||||||||  |
  AAUAGAUGU   UUGGCUACA   UUAU  UUG GA UGUAGCCAAUAU UGUUU UUGGCUACAAUU  A G
CU         CUA         AUU    GU   C  C            G     A            AU U
Stem-loop sequence UUAUUUACACAAACCGAUGUCGAUAUGAACCUUAACAUCGGUUGUAAUAGAAAACCGAUGUUAACGUAUGUAUAUUAACAUCGGUUAUUUGUGUAUAACCGAUGUCAGCGUUUGUAUUUUAACAUCGGUUAUCUGUAGAUAAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006599122.2
ncRNA:24   CUAAUAGAUGUCUAUUGGCUACAA   1
  *|***|=|||||*|||||||||||
targets:381   CAGCCUUUACAGCUAACCGAUGUU   404

2.5 PREDICTED: Glycine max uncharacterized LOC100814948 (LOC100814948), transcript variant X2, mRNA uncharacterized LOC100814948(LOC100814948) coding protein psRNATarget
XM_014768845.1
ncRNA:24   CUAAUAGAUGUCUAUUGGCUACAA   1
  *|***|=|||||*|||||||||||
targets:914   CAGCCUUUACAGCUAACCGAUGUU   937

2.5 PREDICTED: Glycine max uncharacterized LOC100814948 (LOC100814948), transcript variant X1, mRNA uncharacterized LOC100814948(LOC100814948) coding protein psRNATarget