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BaseInfo

ncRNA ID	novel_gma_miR8950
Species	Glycine max
Class	miRNA
Genome position	Chr11:15452506-15452701 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451621
Length	24
Mature sequence(if miRNA)	173 - AUUAUUAUUAUGUUGGCUCUAGCU - 196
Stem-loop(if miRNA)	--             UG                AA          G     A      -AU    GCUAAAACGAAAAUGG          UAUUA AA   ACA   AUUAUUAUUAUGU  GCUCUAGCUGAAAGCC  UUUUUAUGUU UGAUU UAGGAG   GCAU                UUUUCUUUGA     C  CCU   C   |||||||||||||  ||||||||||||||||  |||||||||| ||||| ||||||   ||||                ||||||||||     |  |||   A   UAAUAAUAAUACA  UGAGAUCGACUUUUGG  AAAAAUAUAA AUUAA GUCCUC   UGUA                AAAAGAAACU     G  GGA   C AA             UA                GA          G     G      AUU    ----------ACUCUA          ----C AA   CCA
Stem-loop sequence	AUUAUUAUUAUGUUGGCUCUAGCUGAAAGCCAAUUUUUAUGUUGUGAUUAUAGGAGAUGCAUGCUAAAACGAAAAUGGUUUUCUUUGAUAUUACAACCUACACACACCAGGAAGCUCAAAGAAAAAUCUCAAUGUUUACUCCUGGAAUUAGAAUAUAAAAAAGGGUUUUCAGCUAGAGUAUACAUAAUAAUAAUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006594603.2	ncRNA:24   UCGAUCUCGGUUGUAUUAUUAUUA   1   |*||=|=||||||||||*|||||| targets:1478   AACUGGGGCCAACAUAAGAAUAAU   1501 Target Full Sequence	2.5	PREDICTED: Glycine max KH domain-containing protein At4g18375-like (LOC100816819), transcript variant X2, mRNA	KH domain-containing protein At4g18375-like(LOC100816819)	coding protein	psRNATarget
XM_006594602.2	ncRNA:24   UCGAUCUCGGUUGUAUUAUUAUUA   1   |*||=|=||||||||||*|||||| targets:1478   AACUGGGGCCAACAUAAGAAUAAU   1501 Target Full Sequence	2.5	PREDICTED: Glycine max KH domain-containing protein At4g18375-like (LOC100816819), transcript variant X1, mRNA	KH domain-containing protein At4g18375-like(LOC100816819)	coding protein	psRNATarget
XM_003536815.3	ncRNA:24   UCGA--UCUCGGUUGUAUUAUUAUUA   1   |*||--||||||||*||||||||||* targets:738   AACUCCAGAGCCAAAAUAAUAAUAAC   763 Target Full Sequence	2.5	PREDICTED: Glycine max gibberellin 2-beta-dioxygenase 2-like (LOC100779525), mRNA	gibberellin 2-beta-dioxygenase 2-like(LOC100779525)	coding protein	psRNATarget
AK287299.1	ncRNA:24   UCGAUCUCGGUUGUAUUAUUAUUA   1   |||*|*||=||||||||||||||* targets:1041   AGCAAAAGUCAACAUAAUAAUAAG   1064 Target Full Sequence	3.0	Glycine max cDNA, clone: GMFL01-49-B21	NA	coding protein	psRNATarget