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BaseInfo

ncRNA ID novel_gma_miR8935
Species Glycine max
Class miRNA
Genome position Chr6:22321775-22321834 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 37 - UAUGAACCAUACGGAUUGUUGAUC - 60
Stem-loop(if miRNA) -----UC          AUAGUCAUACAGAU
       AGCAAUCUGU              U
       ||||||||||              G
       UUAGGCAUAC              C
CUAGUUG          CAAGUAUGCCUAAU
Stem-loop sequence UCAGCAAUCUGUAUAGUCAUACAGAUUGCUAAUCCGUAUGAACCAUACGGAUUGUUGAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006586830.2
ncRNA:24   CUAGUUGUUAGGCAUACCAAGUAU   1
  |=|-||||*|||*|||||||||||
targets:1784   GGU-AACAUUCCAUAUGGUUCAUA   1806

2.5 PREDICTED: Glycine max aldehyde dehydrogenase 22A1-like (LOC100816920), transcript variant X1, mRNA aldehyde dehydrogenase 22A1-like(LOC100816920) coding protein psRNATarget
XM_003534767.3
ncRNA:24   CUAGUUGUUAGGCAUACCAAGUAU   1
  |=|-||||*|||*|||||||||||
targets:2018   GGU-AACAUUCCAUAUGGUUCAUA   2040

2.5 PREDICTED: Glycine max aldehyde dehydrogenase 22A1-like (LOC100816920), transcript variant X2, mRNA aldehyde dehydrogenase 22A1-like(LOC100816920) coding protein psRNATarget