ncRNA ID | novel_gma_miR8923 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:20667166-20667301 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 21 |
Mature sequence(if miRNA) | 116 - CUCAUGAGAACCGUAGGGCCU - 136 |
Stem-loop(if miRNA) |
--            G   GG C             CUA  C    AUUCU   -      - UA     U   CUCAUGAGAACC UAG  C UUCUCUUGCAUCU   GC CAAU     UUG AGUCUU C  CCCAA G   |||||||||||| |||  | |||||||||||||   || ||||     ||| |||||| |  ||||| C   GAGUACUCUUGG AUC  G AAGAGAACGUAGA   CG GUUA     AAC UUAGGA G  GGGUU U CC            G   -A U             AAC  A    --GAC   G      U GG     C |
Stem-loop sequence | CUCAUGAGAACCGUAGGGCCUUCUCUUGCAUCUCUAGCCCAAUAUUCUUUGAGUCUUCUACCCAAUGCUCUUGGGGGGUAGGAUUGCAACAGAUUGAGCCAAAGAUGCAAGAGAAUGACUAGGGUUCUCAUGAGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006603972.2 |
|
1.5 | PREDICTED: Glycine max CLIP-associated protein-like (LOC100802218), transcript variant X1, mRNA | CLIP-associated protein-like(LOC100802218) | coding protein | psRNATarget | |||||||||
XM_014772498.1 |
|
1.5 | PREDICTED: Glycine max vacuolar protein-sorting-associated protein 37 homolog 2-like (LOC100801006), partial mRNA | vacuolar protein-sorting-associated protein 37 homolog 2-like(LOC100801006) | coding protein | psRNATarget |