ncRNA ID | novel_gma_miR8918 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr5:40845876-40845990 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 24 |
Mature sequence(if miRNA) | 92 - AGGACUAAAAUUUGAAUUUUCAUC - 115 |
Stem-loop(if miRNA) |
--       -      A  -     -       AACUA          AA    -CCAU U   UGAAGAU UAAAUU UA UCUUG GAUAAAU     UUUUUAUCCU  AAUA     G A   ||||||| |||||| || ||||| |||||||     ||||||||||  ||||     |   ACUUUUA GUUUAA AU AGGAU UUGUUUA     AAAAGUAGGG  UUAU     C A CU       A      A  C     G       ---AA          AA    UUCUU G |
Stem-loop sequence | UGAAGAUUAAAUUAUAUCUUGGAUAAAUAACUAUUUUUAUCCUAAAAUACCAUGUAAGCUUCUUUAUUAAGGGAUGAAAAAAAUUUGUUGUAGGACUAAAAUUUGAAUUUUCAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003518872.3 |
|
1.5 | PREDICTED: Glycine max COMPASS-like H3K4 histone methylase component WDR5B (LOC100794027), mRNA | COMPASS-like H3K4 histone methylase component WDR5B(LOC100794027) | coding protein | psRNATarget |