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BaseInfo

ncRNA ID novel_gma_miR8918
Species Glycine max
Class miRNA
Genome position Chr5:40845876-40845990 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 92 - AGGACUAAAAUUUGAAUUUUCAUC - 115
Stem-loop(if miRNA) --       -      A  -     -       AACUA          AA    -CCAU U
  UGAAGAU UAAAUU UA UCUUG GAUAAAU     UUUUUAUCCU  AAUA     G A
  ||||||| |||||| || ||||| |||||||     ||||||||||  ||||     |
  ACUUUUA GUUUAA AU AGGAU UUGUUUA     AAAAGUAGGG  UUAU     C A
CU       A      A  C     G       ---AA          AA    UUCUU G
Stem-loop sequence UGAAGAUUAAAUUAUAUCUUGGAUAAAUAACUAUUUUUAUCCUAAAAUACCAUGUAAGCUUCUUUAUUAAGGGAUGAAAAAAAUUUGUUGUAGGACUAAAAUUUGAAUUUUCAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003518872.3
ncRNA:24   CUACUUUUAAGUUUAAAAUCAGGA   1
  ||||||||||||||||||||||*|
targets:1369   GAUGAAAAUUCAAAUUUUAGUCAU   1392

1.5 PREDICTED: Glycine max COMPASS-like H3K4 histone methylase component WDR5B (LOC100794027), mRNA COMPASS-like H3K4 histone methylase component WDR5B(LOC100794027) coding protein psRNATarget