Search result

BaseInfo

ncRNA ID	novel_gma_miR8909
Species	Glycine max
Class	miRNA
Genome position	Chr5:21234890-21234940 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451621
Length	21
Mature sequence(if miRNA)	1 - UUAGUUAGGGUUGUAUUCAGU - 21
Stem-loop(if miRNA)	--     U     UG   U   U  A   UUAGU AGGGU  UAU CAG UG C   ||||| |||||  ||| ||| ||   GAUCA UCCUA  GUA GUC GC C AG     U     GU   -   C  U
Stem-loop sequence	UUAGUUAGGGUUGUAUUCAGUUGACCUCGCCUGAUGUGAUCCUUACUAGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006583721.2	ncRNA:21   UGACUUAUGUUGGGAUUGAUU   1   |=|*|||*||||||||||||* targets:94   AUUUAAUUCAACCCUAACUAC   114 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100800865 (LOC100800865), transcript variant X2, mRNA	uncharacterized LOC100800865(LOC100800865)	coding protein	psRNATarget
XM_006583720.2	ncRNA:21   UGACUUAUGUUGGGAUUGAUU   1   |=|*|||*||||||||||||* targets:94   AUUUAAUUCAACCCUAACUAC   114 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100800865 (LOC100800865), transcript variant X1, mRNA	uncharacterized LOC100800865(LOC100800865)	coding protein	psRNATarget
XM_003529228.3	ncRNA:21   UGACUUAUGUUGGGAUUGAUU   1   |=|*|||*||||||||||||* targets:94   AUUUAAUUCAACCCUAACUAC   114 Target Full Sequence	3.0	PREDICTED: Glycine max uncharacterized LOC100800865 (LOC100800865), transcript variant X3, mRNA	uncharacterized LOC100800865(LOC100800865)	coding protein	psRNATarget