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BaseInfo

ncRNA ID novel_gma_miR8907
Species Glycine max
Class miRNA
Genome position Chr5:18105456-18105514 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 36 - UUGAUUUUCUUAGAUUCUUGGAUU - 59
Stem-loop(if miRNA) -UC      U    --        CUU   C
   CUAAGA UCUA  GAGAUCAA   GAU A
   |||||| ||||  ||||||||   ||| U
   GGUUCU AGAU  UUUUAGUU   CUA A
UUA      U    UC        ---   U
Stem-loop sequence UCCUAAGAUUCUAGAGAUCAACUUGAUCAUAUAUCUUGAUUUUCUUAGAUUCUUGGAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003530596.3
ncRNA:24   UUAGGUUCUUAGAUUCUUUUAGUU   1
  ||--|||||||||||||||||||*
targets:1050   AA--CAAGAAUCUAAGAAAAUCAC   1071

1.0 PREDICTED: Glycine max proline-rich receptor-like protein kinase PERK13 (LOC100807794), mRNA proline-rich receptor-like protein kinase PERK13(LOC100807794) coding protein psRNATarget