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BaseInfo

ncRNA ID novel_gma_miR8891
Species Glycine max
Class miRNA
Genome position Chr4:8134078-8134199 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 22
Mature sequence(if miRNA) 101 - UUGAUUGGAGAACAGCACCAAA - 122
Stem-loop(if miRNA) --                   UAA   C    UUUUACU        --------------         
  UGGUGUUGUUUUUCAAUCA   AAU AGAG       UCGGUAAU              UUGUGUUGAU
  |||||||||||||||||||   ||| ||||       ||||||||              |||||||||C
  ACCACGACAAGAGGUUAGU   UUA UCUC       AGCCAUUG              AACGUAAUUU
AA                   -UC   A    ----CAU        GUGCAUUAUUUCCA         
Stem-loop sequence UGGUGUUGUUUUUCAAUCAUAAAAUCAGAGUUUUACUUCGGUAAUUUGUGUUGAUCUUUAAUGCAAACCUUUAUUACGUGGUUACCGAUACCUCUAAUUCUUGAUUGGAGAACAGCACCAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006585935.2
ncRNA:22   AAACCACGACAAGAGGUUAGUU   1
  ||||||*=||||||||||||||
targets:422   UUUGGUAUUGUUCUCCAAUCAA   443

2.0 PREDICTED: Glycine max mucin-21-like (LOC100790656), transcript variant X3, mRNA mucin-21-like(LOC100790656) coding protein psRNATarget
XM_006585934.2
ncRNA:22   AAACCACGACAAGAGGUUAGUU   1
  ||||||*=||||||||||||||
targets:422   UUUGGUAUUGUUCUCCAAUCAA   443

2.0 PREDICTED: Glycine max mucin-21-like (LOC100790656), transcript variant X2, mRNA mucin-21-like(LOC100790656) coding protein psRNATarget
XM_003554034.3
ncRNA:22   AAACCACGACAAGAGGUUAGUU   1
  |||||||=|||||||||||=||
targets:2005   UUUGGUGUUGUUCUCCAAUUAA   2026

2.5 PREDICTED: Glycine max ABSCISIC ACID-INSENSITIVE 5-like protein 2 (LOC100783666), mRNA ABSCISIC ACID-INSENSITIVE 5-like protein 2(LOC100783666) coding protein psRNATarget
XM_003539959.3
ncRNA:22   AAACCACGACAA-GAGGUUAGUU   1
  ***|||||||||-||||||||||
targets:480   AGAGGUGCUGUUACUCCAAUCAA   502

3.0 PREDICTED: Glycine max senescence-specific cysteine protease SAG39-like (LOC100814159), mRNA senescence-specific cysteine protease SAG39-like(LOC100814159) coding protein psRNATarget
XM_003540943.3
ncRNA:22   AAACCACGACAA-GAGGUUAGUU   1
  ***|||||||||-||||||||||
targets:470   AGAGGUGCUGUUACUCCAAUCAA   492

3.0 PREDICTED: Glycine max ervatamin-B-like (LOC100817009), mRNA ervatamin-B-like(LOC100817009) coding protein psRNATarget