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BaseInfo

ncRNA ID novel_gma_miR8882
Species Glycine max
Class miRNA
Genome position Chr4:42728142-42728202 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621;SRR1451623
Length 24
Mature sequence(if miRNA) 1 - AGCUAAUAACCGUCUUUGAAUGCC - 24
Stem-loop(if miRNA) --                       CGAA  A
  AGCUAAUAACCGUCUUUGAAUGC    GC G
  |||||||||||||||||||||||    ||
  UCGAUUAUUGGCAGAAACUUACG    CG A
AA                       ---A  A
Stem-loop sequence AGCUAAUAACCGUCUUUGAAUGCCGAAGCAGAAGCAGCAUUCAAAGACGGUUAUUAGCUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775607.1
ncRNA:24   CCGUAAGUUUCUGCCAAUAAUCGA   1
  *||||||||||=||||||||||||
targets:1652   AGCAUUCAAAGGCGGUUAUUAGCU   1675

1.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:24   CCGUAAGUUUCUGCCAAUAAUCGA   1
  **|||||||||||||||||||*||
targets:1487   AACAUUCAAAGACGGUUAUUAACU   1510

1.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:24   CCGUAAGUUUCUGCCAAUAAUCGA   1
  **|||||||||||||||||||*||
targets:1542   AACAUUCAAAGACGGUUAUUAACU   1565

1.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget