ncRNA ID | novel_gma_miR8871 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr12:31773111-31773188 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1294477 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAGUUGCUGGAGUGGACUUGGGCC - 24 |
Stem-loop(if miRNA) |
--  UG C   -    UUA      C     -U   C  GG   CU  A UCC CUUU   UAACUG UAGAG  GGA UU  G   ||  | ||| ||||   |||||| |||||  ||| ||   GG  U AGG GAGG   GUUGAU AUCUU  CCU AG  U CC  GU C   U    -UC      -     UC   U  UU |
Stem-loop sequence | CUUGACUCCCUUUUUAUAACUGCUAGAGUGGACUUGGGUUUGAUUCCCUUUCUAUAGUUGCUGGAGUGGACUUGGGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014771299.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102669491 (LOC102669491), transcript variant X2, mRNA | uncharacterized LOC102669491(LOC102669491) | coding protein | psRNATarget | |||||||||
XM_014771298.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102669491 (LOC102669491), transcript variant X1, mRNA | uncharacterized LOC102669491(LOC102669491) | coding protein | psRNATarget | |||||||||
XM_014771300.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC102669491 (LOC102669491), transcript variant X3, mRNA | uncharacterized LOC102669491(LOC102669491) | coding protein | psRNATarget |