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BaseInfo

ncRNA ID novel_gma_miR8857
Species Glycine max
Class miRNA
Genome position Chr3:25997176-25997256 [-]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 58 - GAGGUCGUGAUAUUGUAUAAUUCA - 81
Stem-loop(if miRNA) --     --    A    G          GA   A     AU
  GAGGU  CGUG UAUU UAUAAUUCAU  GCA UGUUU  A
  |||||  |||| |||| ||||||||||  ||| |||||  A
  UUCCG  GUAU AUAA GUAUUAAGUA  UGU AUAAA  A
AG     UU    A    G          -G   -     GU
Stem-loop sequence GAGGUCGUGAUAUUGUAUAAUUCAUGAGCAAUGUUUAUAAAUGAAAUAUGUGAUGAAUUAUGGAAUAAUAUGUUGCCUUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006576790.2
ncRNA:24   ACU-UAAUAUGUUAUAGUGCUGGAG   1
  |||-|*|||*||||||=||||||||
targets:744   UGAUAGUAUUCAAUAUUACGACCUC   768

2.5 PREDICTED: Glycine max uncharacterized LOC102668008 (LOC102668008), mRNA uncharacterized LOC102668008(LOC102668008) coding protein psRNATarget