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BaseInfo

ncRNA ID novel_gma_miR8856
Species Glycine max
Class miRNA
Genome position Chr3:28627218-28627303 [-]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 21
Mature sequence(if miRNA) 66 - CAUUUAUGCACAGACUGUUUA - 86
Stem-loop(if miRNA) ---  -UUU    A   AC       -----A         C  UAUG
   CA    AUGC CAG  UGUUUAA      AUUGUGUGU UC    U
   ||    |||| |||  |||||||      ||||||||| ||    U
   GU    UAUG GUC  AUAAAUU      UAACGUACA AG    A
UAG  UAAU    -   --       GUAUUA         -  UCGU
Stem-loop sequence CAUUUAUGCACAGACUGUUUAAAAUUGUGUGUCUCUAUGUUAUGCUGAACAUGCAAUAUUAUGUUAAAUACUGGUAUUAAUUGGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003556776.3
ncRNA:21   AUUUGUCAGACACGUAUUUAC   1
  |*||||*|||||||*||||||
targets:1347   UUAACAAUCUGUGCCUAAAUG   1367

2.5 PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC100787598), transcript variant X1, mRNA UPF0481 protein At3g47200-like(LOC100787598) coding protein psRNATarget
XM_006605571.2
ncRNA:21   AUUUGUCAGACACGUAUUUAC   1
  |*||||*|||||||*||||||
targets:1383   UUAACAAUCUGUGCCUAAAUG   1403

2.5 PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC100787598), transcript variant X2, mRNA UPF0481 protein At3g47200-like(LOC100787598) coding protein psRNATarget