ncRNA ID | novel_gma_miR8856 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr3:28627218-28627303 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 21 |
Mature sequence(if miRNA) | 66 - CAUUUAUGCACAGACUGUUUA - 86 |
Stem-loop(if miRNA) |
---  -UUU    A   AC       -----A         C  UAUG    CA    AUGC CAG  UGUUUAA      AUUGUGUGU UC    U    ||    |||| |||  |||||||      ||||||||| ||    U    GU    UAUG GUC  AUAAAUU      UAACGUACA AG    A UAG  UAAU    -   --       GUAUUA         -  UCGU |
Stem-loop sequence | CAUUUAUGCACAGACUGUUUAAAAUUGUGUGUCUCUAUGUUAUGCUGAACAUGCAAUAUUAUGUUAAAUACUGGUAUUAAUUGGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003556776.3 |
|
2.5 | PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC100787598), transcript variant X1, mRNA | UPF0481 protein At3g47200-like(LOC100787598) | coding protein | psRNATarget | |||||||||
XM_006605571.2 |
|
2.5 | PREDICTED: Glycine max UPF0481 protein At3g47200-like (LOC100787598), transcript variant X2, mRNA | UPF0481 protein At3g47200-like(LOC100787598) | coding protein | psRNATarget |