| ncRNA ID | ath-miR5645a |
| Species | Arabidopsis thaliana |
| Class | miRNA |
| Genome position | chr3:17418776-17419220 [+] |
| Reference genome | TAIR10 |
| Source | miRBase |
| Length | 20 |
| Mature sequence(if miRNA) | 45 - AUUUGAGUCAUGUCGUUAAG - 64 |
| Stem-loop(if miRNA) |
U A CAAAAAAAA C CUCCU CUCC A C UUC UUGUCUGUUGACACAAAUUUAAACCCUAAAUCCCCAAAUCGAUUUUAUUAUCUGCGAUUUUGAAGUCAAUGUGGG UGUUGACUUUCGAAAUAAAU ACAAAGUUUUUGUUGACUUGUCAUUUGAGUCAUGUCGUUAAGUAGGUUAA UUUACGG GUUAAUGU UUAU UCUGUUAGAACAAAA AACGUUGUUUAUUG AG GUU U |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||| ||||||||||||||| |||||||||||||| || ||| C ACAAUUGAAAGCUUUAUUUA UGUUUCAAAAACAACUGAACGGUAAACUCAGUAUAGCAAUUUAUCCAAUU AAAUGCC CAAUUACA AAUA AGACAAUCUUGUUUU UUGCAGCAAAUAAC UC UGU U A C CUCUUAAAA A ----- AACU G U -UC UUUGUUGCAACAAAACAGAGAACUUUGUUUAUAUUUGGGAUUUAGAGGUUUAGCUAAAAUAAUAGAGUUUUAGUG |
| Stem-loop sequence | UUGUUGACUUUCGAAAUAAAUAACAAAGUUUUUGUUGACUUGUCAUUUGAGUCAUGUCGUUAAGUAGGUUAACAAAAAAAAUUUACGGCGUUAAUGUCUCCUUUAUCUCCUCUGUUAGAACAAAAAAACGUUGUUUAUUGCAGUUCGUUUUGUCUGUUGACACAAAUUUAAACCCUAAAUCCCCAAAUCGAUUUUAUUAUCUGCGAUUUUGAAGUCAAUGUGGGUCUGUGAUUUUGAGAUAAUAAAAUCGAUUUGGAGAUUUAGGGUUUAUAUUUGUUUCAAGAGACAAAACAACGUUGUUUUGUCUCUUCAAUAAACGACGUUGUUUUGUUCUAACAGAUCAAAUAAACAUUAACACCGUAAAAAAAUUCUCUUAACCUAUUUAACGAUAUGACUCAAAUGGCAAGUCAACAAAAACUUUGUCAUUUAUUUCGAAAGUUAACAA |
| 1 | PMID:21940835
"High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis"; Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN; Genome Res. 22:163-176(2012). |