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BaseInfo

ncRNA ID novel_gma_miR8850
Species Glycine max
Class miRNA
Genome position Chr3:41395952-41396052 [-]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 21
Mature sequence(if miRNA) 81 - UCAGUUAGAAUUGGAGUUUCA - 101
Stem-loop(if miRNA) ---                        CAAUAA      GAAUCCUUUAAU
   UCAGUUAGAAUUGGAGUUUCAUUU      UCUACA            G
   ||||||||||||||||||||||||      ||||||
   GGUUAGUCUUAACCUCAAAGUGAA      AGGUGU            C
AAA                        AUCUUC      AUUAUAUCUAAA
Stem-loop sequence UCAGUUAGAAUUGGAGUUUCAUUUCAAUAAUCUACAGAAUCCUUUAAUGCAAAUCUAUAUUAUGUGGACUUCUAAAGUGAAACUCCAAUUCUGAUUGGAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006573286.2
ncRNA:21   ACUUUGAGGUUAAGAUUGACU   1
  **|||||||||||||||=||=
targets:2170   CAAAACUCCAAUUCUAAUUGG   2190

2.5 PREDICTED: Glycine max lactosylceramide 4-alpha-galactosyltransferase-like (LOC100781975), mRNA lactosylceramide 4-alpha-galactosyltransferase-like(LOC100781975) coding protein psRNATarget
NM_001255146.2
ncRNA:21   ACUUUGAGGUUAAGAUUGACU   1
  *||||||*|||||||*|||||
targets:11   AGAAACUACAAUUCUCACUGA   31

2.5 Glycine max COBRA-like protein 4-like (LOC100783410), mRNA COBRA-like protein 4-like(LOC100783410) coding protein psRNATarget
BT093885.1
ncRNA:21   ACUUUGAGGUUAAGAUUGACU   1
  *||||||*|||||||*|||||
targets:13   AGAAACUACAAUUCUCACUGA   33

2.5 Soybean clone JCVI-FLGm-17L18 unknown mRNA NA coding protein psRNATarget