ncRNA ID | novel_gma_miR8850 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr3:41395952-41396052 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 21 |
Mature sequence(if miRNA) | 81 - UCAGUUAGAAUUGGAGUUUCA - 101 |
Stem-loop(if miRNA) |
---                        CAAUAA      GAAUCCUUUAAU    UCAGUUAGAAUUGGAGUUUCAUUU      UCUACA            G    ||||||||||||||||||||||||      ||||||    GGUUAGUCUUAACCUCAAAGUGAA      AGGUGU            C AAA                        AUCUUC      AUUAUAUCUAAA |
Stem-loop sequence | UCAGUUAGAAUUGGAGUUUCAUUUCAAUAAUCUACAGAAUCCUUUAAUGCAAAUCUAUAUUAUGUGGACUUCUAAAGUGAAACUCCAAUUCUGAUUGGAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006573286.2 |
|
2.5 | PREDICTED: Glycine max lactosylceramide 4-alpha-galactosyltransferase-like (LOC100781975), mRNA | lactosylceramide 4-alpha-galactosyltransferase-like(LOC100781975) | coding protein | psRNATarget | |||||||||
NM_001255146.2 |
|
2.5 | Glycine max COBRA-like protein 4-like (LOC100783410), mRNA | COBRA-like protein 4-like(LOC100783410) | coding protein | psRNATarget | |||||||||
BT093885.1 |
|
2.5 | Soybean clone JCVI-FLGm-17L18 unknown mRNA | NA | coding protein | psRNATarget |