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BaseInfo

ncRNA ID novel_gma_miR8842
Species Glycine max
Class miRNA
Genome position Chr1:13434908-13435122 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 192 - UUAAUAAUCGAUGUUGUUUUCAAG - 215
Stem-loop(if miRNA) --  UAU               U     U                -C     UUA           G      U   C              AACA              C
  UG   AUAACAUCGGUUAUU AUAAA AACCGAUGUUAAUAUA  AAACG   ACAUCGGUUAU UAUAAA AAU GAUGUUAAUAUGUA    UUGACAUCGGUUUU U
  ||   ||||||||||||||| ||||| ||||||||||||||||  |||||   ||||||||||| |||||| ||| ||||||||||||||    |||||||||||||| A
  AC   UGUUGUAGCUAAUAA UGUUU UUGGCUACAAUUAUAU  UUUGU   UGUAGCCAAUA AUGUUU UUG CUACAGUUGUACGU    AAUUGUAGCUAAAA G
GA  UUU               U     -                CA     ---           A      -   A              --GG              U
Stem-loop sequence UGUAUAUAACAUCGGUUAUUUAUAAAUAACCGAUGUUAAUAUACAAACGUUAACAUCGGUUAUGUAUAAAUAAUCGAUGUUAAUAUGUAAACAUUGACAUCGGUUUUCUAGUAAAAUCGAUGUUAAGGUGCAUGUUGACAUCAGUUUUUGUAAAUAACCGAUGUUGUUUACUAUAUUAACAUCGGUUUUUGUUAAUAAUCGAUGUUGUUUUCAAG