ncRNA ID | novel_gma_miR8833 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr3:16994953-16995109 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 24 |
Mature sequence(if miRNA) | 134 - AAGUUAAAGGACCAAAAUGAAAUU - 157 |
Stem-loop(if miRNA) |
--A         -        A   C     U           UUU         GUUUAUCAAUUGCUG   AA  U      U  A    UUCAUUUUG UCCUUUAA UUU AAAUU GAGUCAUUUUG   UUUUUUUGU               CAA  UG AAAAUA UA C    ||||||||| |||||||| ||| ||||| |||||||||||   |||||||||               |||  || |||||| ||    AAGUAAAAC AGGAAAUU AAA UUUAA CUCAGUAAAAC   AGGAAAACA               GUU  AC UUUUAU AU A UUA         C        G   A     U           --C         ---------------   GA  -      U  A |
Stem-loop sequence | AUUCAUUUUGUCCUUUAAAUUUCAAAUUUGAGUCAUUUUGUUUUUUUUUUGUGUUUAUCAAUUGCUGCAAAAUGUAAAAUAUUAACAAUAUUAUUUUCAAGUUGACAAAAGGACCAAAAUGACUCUAAUUUAAAAGUUAAAGGACCAAAAUGAAAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014765354.1 |
|
2.5 | PREDICTED: Glycine max ATP-dependent DNA helicase pfh1-like (LOC102659864), mRNA | ATP-dependent DNA helicase pfh1-like(LOC102659864) | coding protein | psRNATarget |