Search result

BaseInfo

ncRNA ID novel_gma_miR8815
Species Glycine max
Class miRNA
Genome position Chr3:15095302-15095353 [-]
Reference genome Glycine_max_v2.0
Source SRR1294476
Length 24
Mature sequence(if miRNA) 29 - UCUUAAAUGCAUACGUCGGGCGCC - 52
Stem-loop(if miRNA) --     A     U    -     -  
  UCUUA AUGCA ACGU CGGGC GCC
  ||||| ||||| |||| ||||| ||A
  AGAAU UGUGU UGUA GCCCG CGU
GA     C     -    A     U  
Stem-loop sequence UCUUAAAUGCAUACGUCGGGCGCCAUGCUGCCCGAAUGUUGUGUCUAAGAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003523641.3
ncRNA:24   CCGCGGGCUGCAUACGUAAAUUCU   1
  **=*|||*||*|||||||||||||
targets:2617   AUUUCCCAACUUAUGCAUUUAAGA   2640

2.0 PREDICTED: Glycine max G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 (LOC100782258), mRNA G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5(LOC100782258) coding protein psRNATarget