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BaseInfo

ncRNA ID	novel_gma_miR8812
Species	Glycine max
Class	miRNA
Genome position	Chr2:34508086-34508277 [+]
Reference genome	Glycine_max_v2.0
Source	SRR1451621
Length	21
Mature sequence(if miRNA)	172 - UUUAGGGACUAAAAAGAUAGU - 192
Stem-loop(if miRNA)	--             G      G    -UCUUAC  A       G             ----CA     --   UU        -AA   -     AUCCU   UAUCUUUUUAGUU CUGAAU UUUU       UG UUUUAGU CCUGAAUUUUUUU      UCCUC  CUU  UAGGGACU   AAG UAAAA     A   ||||||||||||| |||||| ||||       || ||||||| |||||||||||||      |||||  |||  ||||||||   ||| |||||   AUAGAAAAAUCAG GAUUUG AGAG       AC AAAGUCA GGACUUAAGAAAA      AGGAG  GAG  GUUUUUGG   UUC GUUUU     A UG             G      A    UCCUAAA  A       -             AUGAUC     UC   UU        AAG   U     GUUAA
Stem-loop sequence	UAUCUUUUUAGUUGCUGAAUGUUUUUCUUACUGAUUUUAGUGCCUGAAUUUUUUUCAUCCUCCUUUUUAGGGACUAAAAGUAAAAAUCCUAAAAUUGUUUUGUCUUGAAGGUUUUUGUUGAGCUGAGGACUAGUAAAAAGAAUUCAGGACUGAAAACAAAAUCCUGAGAAGUUUAGGGACUAAAAAGAUAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003521871.3	ncRNA:21   UGAUAGAAAAAUCAGGGAUUU   1   |*||||**||||||||||||| targets:2432   AGUAUCACUUUAGUCCCUAAA   2452 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100805208 (LOC100805208), transcript variant X2, mRNA	uncharacterized LOC100805208(LOC100805208)	coding protein	psRNATarget
XM_006576293.2	ncRNA:21   UGAUAGAAAAAUCAGGGAUUU   1   |*||||**||||||||||||| targets:2460   AGUAUCACUUUAGUCCCUAAA   2480 Target Full Sequence	2.0	PREDICTED: Glycine max uncharacterized LOC100805208 (LOC100805208), transcript variant X1, mRNA	uncharacterized LOC100805208(LOC100805208)	coding protein	psRNATarget
XM_006575088.2	ncRNA:21   UGAUAGAAAAAUCAGGGAUUU   1   |=|||*|||||||||=||||| targets:2152   AUUAUGUUUUUAGUCUCUAAA   2172 Target Full Sequence	2.5	PREDICTED: Glycine max protein kinase and PP2C-like domain-containing protein (LOC100785390), transcript variant X3, mRNA	protein kinase and PP2C-like domain-containing protein(LOC100785390)	coding protein	psRNATarget
XM_003518940.3	ncRNA:21   UGAUAGAAAAAUCAGGGAUUU   1   |=|||*|||||||||=||||| targets:2271   AUUAUGUUUUUAGUCUCUAAA   2291 Target Full Sequence	2.5	PREDICTED: Glycine max protein kinase and PP2C-like domain-containing protein (LOC100785390), transcript variant X2, mRNA	protein kinase and PP2C-like domain-containing protein(LOC100785390)	coding protein	psRNATarget
XM_006575087.2	ncRNA:21   UGAUAGAAAAAUCAGGGAUUU   1   |=|||*|||||||||=||||| targets:2304   AUUAUGUUUUUAGUCUCUAAA   2324 Target Full Sequence	2.5	PREDICTED: Glycine max protein kinase and PP2C-like domain-containing protein (LOC100785390), transcript variant X1, mRNA	protein kinase and PP2C-like domain-containing protein(LOC100785390)	coding protein	psRNATarget
AK285851.1	ncRNA:21   UGAUAGAAAAAUCAGGGAUUU   1   =|||||*||||=||||||||| targets:769   GCUAUCAUUUUGGUCCCUAAA   789 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-17-H24	NA	coding protein	psRNATarget
XM_014779548.1	ncRNA:21   UGAUAGAAAAAUCAGGGAUUU   1   *||*||||||||||||||*|| targets:842   UCUUUCUUUUUAGUCCCUCAA   862 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100499880 (LOC100499880), transcript variant X3, mRNA	uncharacterized LOC100499880(LOC100499880)	coding protein	psRNATarget
XM_006586564.2	ncRNA:21   UGAUAGAAAAAUCAGGGAUUU   1   *||*||||||||||||||*|| targets:849   UCUUUCUUUUUAGUCCCUCAA   869 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100499880 (LOC100499880), transcript variant X1, mRNA	uncharacterized LOC100499880(LOC100499880)	coding protein	psRNATarget
XM_006586565.2	ncRNA:21   UGAUAGAAAAAUCAGGGAUUU   1   *||*||||||||||||||*|| targets:874   UCUUUCUUUUUAGUCCCUCAA   894 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100499880 (LOC100499880), transcript variant X2, mRNA	uncharacterized LOC100499880(LOC100499880)	coding protein	psRNATarget
XM_006577048.2	ncRNA:21   UGAUAGAAAAAUCAGGGAUUU   1   *=||*||||||||||||||*| targets:1887   CUUACCUUUUUAGUCCCUAUA   1907 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X1, mRNA	uncharacterized LOC100819268(LOC100819268)	coding protein	psRNATarget
XM_014773932.1	ncRNA:21   UGAUAGAAAAAUCAGGGAUUU   1   *=||*||||||||||||||*| targets:1997   CUUACCUUUUUAGUCCCUAUA   2017 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100819268 (LOC100819268), transcript variant X2, mRNA	uncharacterized LOC100819268(LOC100819268)	coding protein	psRNATarget