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BaseInfo

ncRNA ID novel_gma_miR8794
Species Glycine max
Class miRNA
Genome position Chr20:13407489-13407577 [-]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 22
Mature sequence(if miRNA) 68 - AUUGAUCUUGGAUUAGUGGGCC - 89
Stem-loop(if miRNA) --A     C       A    -      CCAUAACUAAAA         C
   UUGAU UUGGAUU GUGG GCCGAA            UUCACUAAU A
   ||||| ||||||| |||| ||||||            |||||||||
   AACUA AACUUAA CACC CGGUUU            AAGUGAUUA U
UUA     U       A    U      ----------UA         A
Stem-loop sequence AUUGAUCUUGGAUUAGUGGGCCGAACCAUAACUAAAAUUCACUAAUCAUAAUUAGUGAAAUUUUGGCUCCACAAAUUCAAUAUCAAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003523817.3
ncRNA:22   CCGGGUGAUUAGGUUCUAGUUA   1
  *|=|*|||=||||||||||||*
targets:495   CGUCGACUGAUCCAAGAUCAAA   516

3.0 PREDICTED: Glycine max E3 ubiquitin-protein ligase RNF5-like (LOC100794086), mRNA E3 ubiquitin-protein ligase RNF5-like(LOC100794086) coding protein psRNATarget