ncRNA ID | novel_gma_miR8794 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:13407489-13407577 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 22 |
Mature sequence(if miRNA) | 68 - AUUGAUCUUGGAUUAGUGGGCC - 89 |
Stem-loop(if miRNA) |
--A     C       A    -      CCAUAACUAAAA         C    UUGAU UUGGAUU GUGG GCCGAA            UUCACUAAU A    ||||| ||||||| |||| ||||||            |||||||||    AACUA AACUUAA CACC CGGUUU            AAGUGAUUA U UUA     U       A    U      ----------UA         A |
Stem-loop sequence | AUUGAUCUUGGAUUAGUGGGCCGAACCAUAACUAAAAUUCACUAAUCAUAAUUAGUGAAAUUUUGGCUCCACAAAUUCAAUAUCAAAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003523817.3 |
|
3.0 | PREDICTED: Glycine max E3 ubiquitin-protein ligase RNF5-like (LOC100794086), mRNA | E3 ubiquitin-protein ligase RNF5-like(LOC100794086) | coding protein | psRNATarget |