Search result

BaseInfo

ncRNA ID novel_gma_miR8790
Species Glycine max
Class miRNA
Genome position Chr20:18430914-18431011 [-]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 21
Mature sequence(if miRNA) 78 - AAGAACUCAUUCAUUUGGUGC - 98
Stem-loop(if miRNA) --    A U             CAUCUG        -        --UG  GU
  AAGA C CAUUCAUUUGGUG      GGUUGAAU AUUAAUUU    GG  C
  |||| | |||||||||||||      |||||||| ||||||||    ||
  UUCU G GUGAGUAAACCAC      UCGAUUUG UAGUUAAG    CC  C
CC    C U             -----A        G        UUUA  AU
Stem-loop sequence AAGAACUCAUUCAUUUGGUGCAUCUGGGUUGAAUAUUAAUUUUGGGGUCCUACCAUUUGAAUUGAUGGUUUAGCUACACCAAAUGAGUGUGCUCUUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003522422.3
ncRNA:21   CGUGGUUUACUUACUCAAGAA   1
  *=|||*||||||*||||||||
targets:1279   AUACCUAAUGAAGGAGUUCUU   1299

2.5 PREDICTED: Glycine max fatty acid amide hydrolase-like (LOC100810903), mRNA fatty acid amide hydrolase-like(LOC100810903) coding protein psRNATarget