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BaseInfo

ncRNA ID	novel_gma_miR8788
Species	Glycine max
Class	miRNA
Genome position	Chr20:26099043-26099127 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451621
Length	24
Mature sequence(if miRNA)	62 - AAAAAUCGAUGUUGUUUUCUGCUC - 85
Stem-loop(if miRNA)	--                 U   CUC               U   AAAAAUCGAUGUUGUUU CUG   AACAACAUCGGUUUU C   ||||||||||||||||| |||   ||||||||||||||| A   UUUUUAGCUACAACAAG GGC   UUGUUGUAGUCAAAA U GC                 U   UUU               U
Stem-loop sequence	AAAAAUCGAUGUUGUUUUCUGCUCAACAACAUCGGUUUUUCAUUAAAACUGAUGUUGUUUUUCGGUGAACAACAUCGAUUUUUCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003546883.3	ncRNA:24   CUCGUCUUUUGUUGUAGCUAAAAA   1   ****|||||=|||||||*|||||| targets:1974   CCUGAGAAAGCAACAUCCAUUUUU   1997 Target Full Sequence	2.5	PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g52620-like (LOC100818123), mRNA	pentatricopeptide repeat-containing protein At1g52620-like(LOC100818123)	coding protein	psRNATarget
XM_003537323.3	ncRNA:24   CUCG-------UCUUUUGUUGUAGCUAAAAA   1   ||||-------=|*|||=||||||||||||* targets:3171   GAGCUCUGGCUGGUAAAUAACAUCGAUUUUG   3201 Target Full Sequence	3.0	PREDICTED: Glycine max probable LRR receptor-like serine/threonine-protein kinase At1g06840 (LOC100799888), transcript variant X2, mRNA	probable LRR receptor-like serine/threonine-protein kinase At1g06840(LOC100799888)	coding protein	psRNATarget
XM_014764169.1	ncRNA:24   CUCG-------UCUUUUGUUGUAGCUAAAAA   1   ||||-------=|*|||=||||||||||||* targets:3229   GAGCUCUGGCUGGUAAAUAACAUCGAUUUUG   3259 Target Full Sequence	3.0	PREDICTED: Glycine max probable LRR receptor-like serine/threonine-protein kinase At1g06840 (LOC100799888), transcript variant X3, mRNA	probable LRR receptor-like serine/threonine-protein kinase At1g06840(LOC100799888)	coding protein	psRNATarget
XM_006591207.2	ncRNA:24   CUCG-------UCUUUUGUUGUAGCUAAAAA   1   ||||-------=|*|||=||||||||||||* targets:3348   GAGCUCUGGCUGGUAAAUAACAUCGAUUUUG   3378 Target Full Sequence	3.0	PREDICTED: Glycine max probable LRR receptor-like serine/threonine-protein kinase At1g06840 (LOC100799888), transcript variant X1, mRNA	probable LRR receptor-like serine/threonine-protein kinase At1g06840(LOC100799888)	coding protein	psRNATarget