ncRNA ID | novel_gma_miR8784 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:38462884-38462950 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GAAAAAAGAGAGGAUUUUGGAAGA - 24 |
Stem-loop(if miRNA) |
--G            --A        AAA      U    UCCGAGAUCUUC   UUUUUCUG   CAGGUU G    ||||||||||||   ||||||||   ||||||    AGGUUUUAGGAG   AAAAAGGC   GUCCGG A AGA            AGA        ---      U |
Stem-loop sequence | GUCCGAGAUCUUCAUUUUUCUGAAACAGGUUUGAUGGCCUGCGGAAAAAAGAGAGGAUUUUGGAAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003519096.3 |
|
2.5 | PREDICTED: Glycine max BTB/POZ domain-containing protein At2g24240-like (LOC100781657), mRNA | BTB/POZ domain-containing protein At2g24240-like(LOC100781657) | coding protein | psRNATarget | |||||||||
XM_003517143.3 |
|
2.5 | PREDICTED: Glycine max B-box zinc finger protein 18-like (LOC100780544), transcript variant X2, mRNA | B-box zinc finger protein 18-like(LOC100780544) | coding protein | psRNATarget |