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BaseInfo

ncRNA ID novel_gma_miR8774
Species Glycine max
Class miRNA
Genome position Chr20:16845527-16845651 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 102 - UAUGAACCAUACGGAUUGUUGAUC - 125
Stem-loop(if miRNA) --                      UA     A           AC -          G    A
  UCAGCAAUCUGUAUGGUUCAUA  GAUCA CAAUCCGUAUG  C AUACGGAUUG CAAU U
  ||||||||||||||||||||||  ||||| |||||||||||  | |||||||||| ||||
  AGUUGUUAGGCAUACCAAGUAU  CUAGU GUUAGGUAUGC  G UAUGCCUAAC GUUA G
CU                      GC     A           CA A          G    G
Stem-loop sequence UCAGCAAUCUGUAUGGUUCAUAUAGAUCAACAAUCCGUAUGACCAUACGGAUUGGCAAUAUGGAUUGGCAAUCCGUAUAGACCGUAUGGAUUGAUGAUCCGUAUGAACCAUACGGAUUGUUGAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006586830.2
ncRNA:24   CUAGUUGUUAGGCAUACCAAGUAU   1
  |=|-||||*|||*|||||||||||
targets:1784   GGU-AACAUUCCAUAUGGUUCAUA   1806

2.5 PREDICTED: Glycine max aldehyde dehydrogenase 22A1-like (LOC100816920), transcript variant X1, mRNA aldehyde dehydrogenase 22A1-like(LOC100816920) coding protein psRNATarget
XM_003534767.3
ncRNA:24   CUAGUUGUUAGGCAUACCAAGUAU   1
  |=|-||||*|||*|||||||||||
targets:2018   GGU-AACAUUCCAUAUGGUUCAUA   2040

2.5 PREDICTED: Glycine max aldehyde dehydrogenase 22A1-like (LOC100816920), transcript variant X2, mRNA aldehyde dehydrogenase 22A1-like(LOC100816920) coding protein psRNATarget