ncRNA ID | novel_gma_miR8774 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:16845527-16845651 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 24 |
Mature sequence(if miRNA) | 102 - UAUGAACCAUACGGAUUGUUGAUC - 125 |
Stem-loop(if miRNA) |
--                      UA     A           AC -          G    A   UCAGCAAUCUGUAUGGUUCAUA  GAUCA CAAUCCGUAUG  C AUACGGAUUG CAAU U   ||||||||||||||||||||||  ||||| |||||||||||  | |||||||||| ||||   AGUUGUUAGGCAUACCAAGUAU  CUAGU GUUAGGUAUGC  G UAUGCCUAAC GUUA G CU                      GC     A           CA A          G    G |
Stem-loop sequence | UCAGCAAUCUGUAUGGUUCAUAUAGAUCAACAAUCCGUAUGACCAUACGGAUUGGCAAUAUGGAUUGGCAAUCCGUAUAGACCGUAUGGAUUGAUGAUCCGUAUGAACCAUACGGAUUGUUGAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006586830.2 |
|
2.5 | PREDICTED: Glycine max aldehyde dehydrogenase 22A1-like (LOC100816920), transcript variant X1, mRNA | aldehyde dehydrogenase 22A1-like(LOC100816920) | coding protein | psRNATarget | |||||||||
XM_003534767.3 |
|
2.5 | PREDICTED: Glycine max aldehyde dehydrogenase 22A1-like (LOC100816920), transcript variant X2, mRNA | aldehyde dehydrogenase 22A1-like(LOC100816920) | coding protein | psRNATarget |