Search result

BaseInfo

ncRNA ID novel_gma_miR8758
Species Glycine max
Class miRNA
Genome position Chr19:21496691-21496742 [-]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 21
Mature sequence(if miRNA) 1 - UUUUUCAUGCUGAAGAACAUA - 21
Stem-loop(if miRNA) --   -      -AG      A    A
  UGU CUUCAG   GAGGAG GUGA A
  ||| ||||||   |||||| ||||
  ACA GAAGUC   CUUUUU CACU A
AU   A      GUA      A    A
Stem-loop sequence UGUCUUCAGAGGAGGAGAGUGAAAAAUCACAUUUUUCAUGCUGAAGAACAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006583336.2
ncRNA:21   AUACAAGAAGUCGUACUUUUU   1
  |=||*||||||*|||||||||
targets:750   UGUGCUCUUCAACAUGAAAAA   770

2.5 PREDICTED: Glycine max VIN3-like protein 1 (LOC100780157), transcript variant X2, mRNA VIN3-like protein 1(LOC100780157) coding protein psRNATarget
XM_014762269.1
ncRNA:21   AUACAAGAAGUCGUACUUUUU   1
  |=||*||||||*|||||||||
targets:722   UGUGCUCUUCAACAUGAAAAA   742

2.5 PREDICTED: Glycine max VIN3-like protein 1 (LOC100816714), transcript variant X8, mRNA VIN3-like protein 1(LOC100816714) coding protein psRNATarget
XM_006583335.2
ncRNA:21   AUACAAGAAGUCGUACUUUUU   1
  |=||*||||||*|||||||||
targets:817   UGUGCUCUUCAACAUGAAAAA   837

2.5 PREDICTED: Glycine max VIN3-like protein 1 (LOC100780157), transcript variant X3, mRNA VIN3-like protein 1(LOC100780157) coding protein psRNATarget
XM_014762268.1
ncRNA:21   AUACAAGAAGUCGUACUUUUU   1
  |=||*||||||*|||||||||
targets:787   UGUGCUCUUCAACAUGAAAAA   807

2.5 PREDICTED: Glycine max VIN3-like protein 1 (LOC100816714), transcript variant X7, mRNA VIN3-like protein 1(LOC100816714) coding protein psRNATarget
XM_014762267.1
ncRNA:21   AUACAAGAAGUCGUACUUUUU   1
  |=||*||||||*|||||||||
targets:790   UGUGCUCUUCAACAUGAAAAA   810

2.5 PREDICTED: Glycine max VIN3-like protein 1 (LOC100816714), transcript variant X6, mRNA VIN3-like protein 1(LOC100816714) coding protein psRNATarget
XM_014777871.1
ncRNA:21   AUACAAGAAGUCGUACUUUUU   1
  |=||*||||||*|||||||||
targets:881   UGUGCUCUUCAACAUGAAAAA   901

2.5 PREDICTED: Glycine max VIN3-like protein 1 (LOC100780157), transcript variant X4, mRNA VIN3-like protein 1(LOC100780157) coding protein psRNATarget
XM_006587445.2
ncRNA:21   AUACAAGAAGUCGUACUUUUU   1
  |=||*||||||*|||||||||
targets:855   UGUGCUCUUCAACAUGAAAAA   875

2.5 PREDICTED: Glycine max VIN3-like protein 1 (LOC100816714), transcript variant X1, mRNA VIN3-like protein 1(LOC100816714) coding protein psRNATarget
XM_006587444.2
ncRNA:21   AUACAAGAAGUCGUACUUUUU   1
  |=||*||||||*|||||||||
targets:914   UGUGCUCUUCAACAUGAAAAA   934

2.5 PREDICTED: Glycine max VIN3-like protein 1 (LOC100816714), transcript variant X2, mRNA VIN3-like protein 1(LOC100816714) coding protein psRNATarget
XM_014762264.1
ncRNA:21   AUACAAGAAGUCGUACUUUUU   1
  |=||*||||||*|||||||||
targets:962   UGUGCUCUUCAACAUGAAAAA   982

2.5 PREDICTED: Glycine max VIN3-like protein 1 (LOC100816714), transcript variant X3, mRNA VIN3-like protein 1(LOC100816714) coding protein psRNATarget
XM_014762265.1
ncRNA:21   AUACAAGAAGUCGUACUUUUU   1
  |=||*||||||*|||||||||
targets:1021   UGUGCUCUUCAACAUGAAAAA   1041

2.5 PREDICTED: Glycine max VIN3-like protein 1 (LOC100816714), transcript variant X4, mRNA VIN3-like protein 1(LOC100816714) coding protein psRNATarget
XM_014777870.1
ncRNA:21   AUACAAGAAGUCGUACUUUUU   1
  |=||*||||||*|||||||||
targets:1143   UGUGCUCUUCAACAUGAAAAA   1163

2.5 PREDICTED: Glycine max VIN3-like protein 1 (LOC100780157), transcript variant X1, mRNA VIN3-like protein 1(LOC100780157) coding protein psRNATarget
XM_014762266.1
ncRNA:21   AUACAAGAAGUCGUACUUUUU   1
  |=||*||||||*|||||||||
targets:2569   UGUGCUCUUCAACAUGAAAAA   2589

2.5 PREDICTED: Glycine max VIN3-like protein 1 (LOC100816714), transcript variant X5, mRNA VIN3-like protein 1(LOC100816714) coding protein psRNATarget
XM_014777325.1
ncRNA:21   AUACAAGAAGUCGUACUUUUU   1
  |*|||||||||||||||*||*
targets:1761   UUUGUUCUUCAGCAUGACAAU   1781

2.5 PREDICTED: Glycine max uncharacterized LOC100526875 (LOC100526875), transcript variant X1, mRNA uncharacterized LOC100526875(LOC100526875) coding protein psRNATarget
XM_006584786.2
ncRNA:21   AUACAAGAAGUCGUACUUUUU   1
  |=||**||||||||||||||=
targets:941   UGUGCCCUUCAGCAUGAAAAG   961

3.0 PREDICTED: Glycine max VIN3-like protein 1 (LOC100815645), transcript variant X4, mRNA VIN3-like protein 1(LOC100815645) coding protein psRNATarget
XM_006584783.2
ncRNA:21   AUACAAGAAGUCGUACUUUUU   1
  |=||**||||||||||||||=
targets:842   UGUGCCCUUCAGCAUGAAAAG   862

3.0 PREDICTED: Glycine max VIN3-like protein 1 (LOC100815645), transcript variant X2, mRNA VIN3-like protein 1(LOC100815645) coding protein psRNATarget
XM_006584782.2
ncRNA:21   AUACAAGAAGUCGUACUUUUU   1
  |=||**||||||||||||||=
targets:941   UGUGCCCUUCAGCAUGAAAAG   961

3.0 PREDICTED: Glycine max VIN3-like protein 1 (LOC100815645), transcript variant X1, mRNA VIN3-like protein 1(LOC100815645) coding protein psRNATarget
XM_006584784.2
ncRNA:21   AUACAAGAAGUCGUACUUUUU   1
  |=||**||||||||||||||=
targets:1017   UGUGCCCUUCAGCAUGAAAAG   1037

3.0 PREDICTED: Glycine max VIN3-like protein 1 (LOC100815645), transcript variant X3, mRNA VIN3-like protein 1(LOC100815645) coding protein psRNATarget
XM_014767825.1
ncRNA:21   AUACAAGAAGUCGUACUUUUU   1
  ****||||||||||||||||*
targets:332   CUCAUUCUUCAGCAUGAAAAU   352

3.0 PREDICTED: Glycine max homeobox-leucine zipper protein HDG11-like (LOC100795753), mRNA homeobox-leucine zipper protein HDG11-like(LOC100795753) coding protein psRNATarget
XM_006586790.2
ncRNA:21   AUACAAGAAGUCGUACUUUUU   1
  ****||||||||||||||||*
targets:930   CCAAUUCUUCAGCAUGAAAAU   950

3.0 PREDICTED: Glycine max homeobox-leucine zipper protein HDG11-like (LOC100795075), mRNA homeobox-leucine zipper protein HDG11-like(LOC100795075) coding protein psRNATarget