Search result

BaseInfo

ncRNA ID ath-miR2933b
Species Arabidopsis thaliana
Class miRNA
Genome position chr3:17402762-17402873 [-]
Reference genome TAIR10
Source miRBase
Length 22
Mature sequence(if miRNA) 33 - GAAAUCGGAGAGGAAAUUCGCC - 54
Stem-loop(if miRNA) GAAA   G  GG        AG        GA A G     - G  GG       G
    UUC UU  CGAUUUUG  UGAAAUCG  G G GAAUU C UC  UGAUUUU A
    ||| ||  ||||||||  ||||||||  | | ||||| | ||  |||||||
    AAG AG  GCUAAAGU  GUUUUAGC  C C CUUAA G AG  GCUAAAG G
CUAA   G  AG        GA        GG - G     A G  AG       U
Stem-loop sequence GAAAUUCGUUGGCGAUUUUGAGUGAAAUCGGAGAGGGAAUUCGUCGGUGAUUUUGAGUGAAAUCGGAGAGGAAAUUCGCCGGCGAUUUUGAGUGAAAUCGGAGAGGAAAAUC

Reference

1 PMID:20042113
"MicroRNA and tasiRNA diversity in mature pollen of Arabidopsis thaliana";
Grant-Downton R, Le Trionnaire G, Schmid R, Rodriguez-Enriquez J, Hafidh S, Mehdi S, Twell D, Dickinson H;
BMC Genomics. 10:643(2009).