Search result

BaseInfo

ncRNA ID	novel_gma_miR8750
Species	Glycine max
Class	miRNA
Genome position	Chr19:37094047-37094122 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451621
Length	21
Mature sequence(if miRNA)	56 - CUUCUACAUGCUUUAGGAUAA - 76
Stem-loop(if miRNA)	--                             G   GCU   CUUCUACAUGCUUUAGGAUAAUCAUUCAU AUG   U   ||||||||||||||||||||||||||||| |||   GAAGAUGUACGAAAUCCUAUUAGUAAGUA UAC   G UA                             G   AUA
Stem-loop sequence	CUUCUACAUGCUUUAGGAUAAUCAUUCAUGAUGGCUUGAUACAUGAUGAAUGAUUAUCCUAAAGCAUGUAGAAGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014763897.1	ncRNA:21   AAUAGGAUUUCGUACAUCUUC   1   **=|||||||*|||||||||| targets:1265   AAGUCCUAAAACAUGUAGAAG   1285 Target Full Sequence	2.5	PREDICTED: Glycine max bifunctional nuclease 2-like (LOC100816098), mRNA	bifunctional nuclease 2-like(LOC100816098)	coding protein	psRNATarget
XM_006589094.2	ncRNA:21   AAUAGGAUUUCGUACAUCUUC   1   *|||*||||||*||||||||| targets:952   AUAUGCUAAAGGAUGUAGAAG   972 Target Full Sequence	2.5	PREDICTED: Glycine max vesicle-associated protein 2-2-like (LOC100783454), transcript variant X2, mRNA	vesicle-associated protein 2-2-like(LOC100783454)	coding protein	psRNATarget
XM_006589093.2	ncRNA:21   AAUAGGAUUUCGUACAUCUUC   1   *|||*||||||*||||||||| targets:1146   AUAUGCUAAAGGAUGUAGAAG   1166 Target Full Sequence	2.5	PREDICTED: Glycine max vesicle-associated protein 2-2-like (LOC100783454), transcript variant X1, mRNA	vesicle-associated protein 2-2-like(LOC100783454)	coding protein	psRNATarget
XM_014763194.1	ncRNA:21   AAUAGGAUUUCGUACAUCUUC   1   *|||*||||||*||||||||| targets:1147   AUAUGCUAAAGGAUGUAGAAG   1167 Target Full Sequence	2.5	PREDICTED: Glycine max vesicle-associated protein 2-2-like (LOC100783454), transcript variant X3, mRNA	vesicle-associated protein 2-2-like(LOC100783454)	coding protein	psRNATarget