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BaseInfo

ncRNA ID novel_gma_miR8745
Species Glycine max
Class miRNA
Genome position Chr19:512180-512352 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 1 - GUUUGUGUCUUUUCAAUUUUGGUC - 24
Stem-loop(if miRNA) --GU      C             -  CUUG      -AUAU            U    C           AC    -UUUUUU   A
    UUGUGU UUUUCAAUUUUGG UC    UAAGAU     UUUUUUUCAUUU UAGU CCUAUAAGUUU  GUUU       UCA U
    |||||| ||||||||||||| ||    ||||||     |||||||||||| |||| |||||||||||  ||||       |||
    AAUACA AAAAGUUAAAAUU AG    AUUUUA     AAAAAAAGUAAA AUUA GGGUGUUUAAG  CGAA       GGU U
UCCU      A             U  UUAA      AAAUU            U    U           CA    UGUUCCU   U
Stem-loop sequence GUUUGUGUCUUUUCAAUUUUGGUCCUUGUAAGAUAUAUUUUUUUUCAUUUUUAGUCCCUAUAAGUUUACGUUUUUUUUUUCAAUUUUGGUCCUUGUAAGCACGAAUUUGUGGGUAUUAUAAAUGAAAAAAAUUAAAAUUUUAAAUUGAUUUAAAAUUGAAAAAACAUAAUCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003551446.3
ncRNA:24   CUGGUUUUAACUUUUCUGUGUUUG   1
  *|=*||=|*|||||||||||||||
targets:1691   AAUGAAGAAUGAAAAGACACAAAC   1714

2.0 PREDICTED: Glycine max cytochrome P450 71D9-like (LOC100818000), mRNA cytochrome P450 71D9-like(LOC100818000) coding protein psRNATarget