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BaseInfo

ncRNA ID	novel_gma_miR8730
Species	Glycine max
Class	miRNA
Genome position	Chr18:3254659-3254836 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451621
Length	24
Mature sequence(if miRNA)	155 - AUGAUUUUGACUUUUGACAUCAGU - 178
Stem-loop(if miRNA)	--A       G            A                            C  ------       A  AUCAC   UG          U    UGAUUUU ACUUUUGACAUC GUUGUAGUUAUAAUCGAUGUAGAAAAGU AC      AUUGGUU UA     AAC  AUGUAAAAAG A    ||||||| |||||||||||| |||||||||||||||||||||||||||| ||      ||||||| ||     |||  ||||||||||    ACUAAAA UGAAAAUUGUAG UAACAUUAAUAUUAGCUACAUCUUUUCA UG      UAACCAA AU     UUG  UACGUUUUUU A CCC       G            C                            C  AAAAAA       C  CAAUA   CA          C
Stem-loop sequence	AUGAUUUUGACUUUUGACAUCAGUUGUAGUUAUAAUCGAUGUAGAAAAGUCACAUUGGUUAUAAUCACAACUGAUGUAAAAAGUAACUUUUUUGCAUACGUUAUAACUACAACCAAUAAAAAAGUCACUUUUCUACAUCGAUUAUAAUUACAAUCGAUGUUAAAAGUGAAAAUCACCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014773515.1	ncRNA:24   UGACUAC-AGUUUUCAGUUUUAGUA   1   |=*||*|-||||||||||||||||| targets:268   AUAGAGGAUCAAAAGUCAAAAUCAU   292 Target Full Sequence	3.0	PREDICTED: Glycine max protein trichome birefringence-like 35 (LOC100789158), transcript variant X3, mRNA	protein trichome birefringence-like 35(LOC100789158)	coding protein	psRNATarget
XM_006576440.2	ncRNA:24   UGACUAC-AGUUUUCAGUUUUAGUA   1   |=*||*|-||||||||||||||||| targets:237   AUAGAGGAUCAAAAGUCAAAAUCAU   261 Target Full Sequence	3.0	PREDICTED: Glycine max protein trichome birefringence-like 35 (LOC100789158), transcript variant X1, mRNA	protein trichome birefringence-like 35(LOC100789158)	coding protein	psRNATarget
XM_006576439.2	ncRNA:24   UGACUAC-AGUUUUCAGUUUUAGUA   1   |=*||*|-||||||||||||||||| targets:263   AUAGAGGAUCAAAAGUCAAAAUCAU   287 Target Full Sequence	3.0	PREDICTED: Glycine max protein trichome birefringence-like 35 (LOC100789158), transcript variant X2, mRNA	protein trichome birefringence-like 35(LOC100789158)	coding protein	psRNATarget