ncRNA ID | novel_gma_miR8729 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:9999378-9999509 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 21 |
Mature sequence(if miRNA) | 112 - UAGUUAGAAUUUAUUGAAAAU - 132 |
Stem-loop(if miRNA) |
--UA                     C AU         A    A       GUUAA    UUUUUCU     GUUAGAAUUUAUUGAAAAUCA C  UUUUGGUAG UUUU CUUCUUA     UGAU       C     ||||||||||||||||||||| |  ||||||||| |||| |||||||     ||||       C     UAAUCUUAAAUAACUUUUAGU G  AAAACUAUU AAAA GAAGAAU     ACUG       U UAAA                     A CU         C    C       ---AA    UACCUCG |
Stem-loop sequence | UAGUUAGAAUUUAUUGAAAAUCACCAUUUUUGGUAGAUUUUACUUCUUAGUUAAUGAUUUUUUCUCCUGCUCCAUGUCAAAUAAGAAGCAAAACUUAUCAAAAUCGAUGAUUUUCAAUAAAUUCUAAUAAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003516862.3 |
|
2.5 | PREDICTED: Glycine max copper transporter 2-like (LOC100808693), mRNA | copper transporter 2-like(LOC100808693) | coding protein | psRNATarget |