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BaseInfo

ncRNA ID novel_gma_miR8729
Species Glycine max
Class miRNA
Genome position Chr18:9999378-9999509 [-]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 21
Mature sequence(if miRNA) 112 - UAGUUAGAAUUUAUUGAAAAU - 132
Stem-loop(if miRNA) --UA                     C AU         A    A       GUUAA    UUUUUCU
    GUUAGAAUUUAUUGAAAAUCA C  UUUUGGUAG UUUU CUUCUUA     UGAU       C
    ||||||||||||||||||||| |  ||||||||| |||| |||||||     ||||       C
    UAAUCUUAAAUAACUUUUAGU G  AAAACUAUU AAAA GAAGAAU     ACUG       U
UAAA                     A CU         C    C       ---AA    UACCUCG
Stem-loop sequence UAGUUAGAAUUUAUUGAAAAUCACCAUUUUUGGUAGAUUUUACUUCUUAGUUAAUGAUUUUUUCUCCUGCUCCAUGUCAAAUAAGAAGCAAAACUUAUCAAAAUCGAUGAUUUUCAAUAAAUUCUAAUAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003516862.3
ncRNA:21   UAAAAGUUAUUUAAGAUUGAU   1
  |||||=||||||||=||||||
targets:589   AUUUUUAAUAAAUUUUAACUA   609

2.5 PREDICTED: Glycine max copper transporter 2-like (LOC100808693), mRNA copper transporter 2-like(LOC100808693) coding protein psRNATarget