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BaseInfo

ncRNA ID novel_gma_miR8715
Species Glycine max
Class miRNA
Genome position Chr1:7214762-7214860 [-]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 22
Mature sequence(if miRNA) 78 - CGGAGGAGUGAAUCUGAGAACA - 99
Stem-loop(if miRNA) --      A    A               CU    UG A  GC       U
  CGGAGG GUGA UCUGAGAACACAAGG  GGUU  C CU  UAUAUCA C
  |||||| |||| |||||||||||||||  ||||  | ||  ||||||| U
  GUUUCC CACU GGACUCUUGUGUUUC  UUAA  G GA  AUAUGGU A
GA      C    -               AU    GU -  --       U
Stem-loop sequence CGGAGGAGUGAAUCUGAGAACACAAGGCUGGUUUGCACUGCUAUAUCAUCUAUUGGUAUAAGGUGAAUUUACUUUGUGUUCUCAGGUCACCCCUUUGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006590736.2
ncRNA:22   ACAAGAGUCUAAGUGAGGAGGC   1
  ***||||||||||*||||||||
targets:173   CACUCUCAGAUUCUCUCCUCCG   194

1.5 PREDICTED: Glycine max ENHANCER OF AG-4 protein 2-like (LOC100810034), transcript variant X5, mRNA ENHANCER OF AG-4 protein 2-like(LOC100810034) coding protein psRNATarget