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BaseInfo

ncRNA ID novel_gma_miR8708
Species Glycine max
Class miRNA
Genome position Chr18:40072417-40072489 [-]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 50 - GUUUCUUGUAGAACAUUUAGGCAC - 73
Stem-loop(if miRNA) --       G    A   UU    ACAC  AAUUUGUUU
  GUUUCUU UAGA CAU  AGGC    GC         U
  ||||||| |||| |||  ||||    ||
  CAAAGAA AUCU GUA  UCCG    AA         C
AC       -    -   CU    ---A  GAAAAGUUU
Stem-loop sequence GUUUCUUGUAGAACAUUUAGGCACACGCAAUUUGUUUUCUUUGAAAAGAAAGCCUUCAUGUCUAAAGAAACCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014777009.1
ncRNA:24   CACGGAUUUACAAGAUGUUCUUUG   1
  |||||||||||||||||*|||||=
targets:25   GUGCCUAAAUGUUCUACUAGAAAU   48

2.5 PREDICTED: Glycine max uncharacterized LOC106799057 (LOC106799057), partial mRNA uncharacterized LOC106799057(LOC106799057) coding protein psRNATarget
XM_014771646.1
ncRNA:24   CACGGAUUUACAAGAUGUUCUUUG   1
  |||||||||||||||||*|||||=
targets:1993   GUGCCUAAAUGUUCUACUAGAAAU   2016

2.5 PREDICTED: Glycine max uncharacterized LOC106797370 (LOC106797370), partial mRNA uncharacterized LOC106797370(LOC106797370) coding protein psRNATarget
XM_014766187.1
ncRNA:24   CACGGAUUUACAAGAUGUUCUUUG   1
  |||||||||||||||||*|||||=
targets:2041   GUGCCUAAAUGUUCUACUAGAAAU   2064

2.5 PREDICTED: Glycine max uncharacterized LOC106795601 (LOC106795601), partial mRNA uncharacterized LOC106795601(LOC106795601) coding protein psRNATarget
XM_014766720.1
ncRNA:24   CACGGAUUUACAAGAUGUUCUUUG   1
  |||||||||||||||||*|||||=
targets:1984   GUGCCUAAAUGUUCUACUAGAAAU   2007

2.5 PREDICTED: Glycine max uncharacterized LOC106795805 (LOC106795805), partial mRNA uncharacterized LOC106795805(LOC106795805) coding protein psRNATarget
XM_014771475.1
ncRNA:24   CACGGAUUUACAAGAUGUUCUUUG   1
  |||||||||||||||||*|||||=
targets:3398   GUGCCUAAAUGUUCUACUAGAAAU   3421

2.5 PREDICTED: Glycine max uncharacterized LOC100788838 (LOC100788838), partial mRNA uncharacterized LOC100788838(LOC100788838) coding protein psRNATarget
XM_014773184.1
ncRNA:24   CACGGAUUUACAAGAUGUUCUUUG   1
  |||||||||||||||||*|||||=
targets:5590   GUGCCUAAAUGUUCUACUAGAAAU   5613

2.5 PREDICTED: Glycine max uncharacterized LOC106797892 (LOC106797892), partial mRNA uncharacterized LOC106797892(LOC106797892) coding protein psRNATarget