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BaseInfo

ncRNA ID novel_gma_miR8702
Species Glycine max
Class miRNA
Genome position Chr18:57333386-57333472 [-]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 22
Mature sequence(if miRNA) 1 - UGGUGGAACUUUGAGGCUUGUU - 22
Stem-loop(if miRNA) --   C        GCU          CAUA      UCCA    G
  CAA CCUCAAAG   UCCACUACUU    UUUCAU    GUGA A
  ||| ||||||||   ||||||||||    ||||||    |||| A
  GUU GGAGUUUC   AGGUGGUGAA    AAAGUA    CACU U
UU   C        --A          ----      CAAA    A
Stem-loop sequence CAACCCUCAAAGGCUUCCACUACUUCAUAUUUCAUUCCAGUGAGAAUAUCACAAACAUGAAAAAGUGGUGGAACUUUGAGGCUUGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003554543.3
ncRNA:22   UUGUUCGGAGUUUCAAGGUGGU   1
  =|||*||||||||||||*||||
targets:1738   GACAUGCCUCAAAGUUCAACCA   1759

2.5 PREDICTED: Glycine max transmembrane protein 184A-like (LOC100790047), mRNA transmembrane protein 184A-like(LOC100790047) coding protein psRNATarget