ncRNA ID | novel_gma_miR8700 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:6843889-6844043 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 24 |
Mature sequence(if miRNA) | 132 - AAGGACUAAAAAGAUAUUUAAGCC - 155 |
Stem-loop(if miRNA) |
-C         A           CG   UUU   GCU     GC               AUU       UUU      UAG   UUUAAAUAU UUUUUGGUCCU  CAA   AGU   UUUUU  UUUUAGUCCUUGCAA   AUGUUUG   UGUUUU   U   ||||||||| |||||||||||  |||   |||   |||||  |||||||||||||||   |||||||   ||||||   GAAUUUAUA AAAAAUCAGGA  GUU   UUA   AAAAG  AAAAUCAGGAACGUU   UAUAGAU   ACGAAA   C CC         G           AG   ---   -AU     -A               ---       UUC      UUC |
Stem-loop sequence | CUUUAAAUAUAUUUUUGGUCCUCGCAAUUUAGUGCUUUUUUGCUUUUAGUCCUUGCAAAUUAUGUUUGUUUUGUUUUUAGUCCUUAAAGCACUUUAGAUAUUUGCAAGGACUAAAAAGAAAAUAAUUUUGGAAGGACUAAAAAGAUAUUUAAGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006596239.2 |
|
2.5 | PREDICTED: Glycine max uncharacterized protein At1g04910-like (LOC100784797), mRNA | uncharacterized protein At1g04910-like(LOC100784797) | coding protein | psRNATarget |