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BaseInfo

ncRNA ID novel_gma_miR8688
Species Glycine max
Class miRNA
Genome position Chr18:5546373-5546453 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 1 - AUGUUUAAAUUAUACUUACGGAUU - 24
Stem-loop(if miRNA) --            U           UCA           
  AUGUUUAAAUUA ACUUACGGAUU   UGAUCCGUAUAU
  |||||||||||| |||||||||||   |||||||||||U
  UACAAAUUUAAU UGAAUGCCUAG   AUUAGGCAUAUU
UA            U           UAC           
Stem-loop sequence AUGUUUAAAUUAUACUUACGGAUUUCAUGAUCCGUAUAUUUUAUACGGAUUACAUGAUCCGUAAGUUUAAUUUAAACAUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014779392.1
ncRNA:24   UUAGGCAUUCAUAUUAAAUUUGUA   1
  =||*||*|||||||||||||||||
targets:1537   GAUACGAAAGUAUAAUUUAAACAU   1560

1.0 PREDICTED: Glycine max actin-related protein 2/3 complex subunit 1B-like (LOC100778212), transcript variant X2, mRNA actin-related protein 2/3 complex subunit 1B-like(LOC100778212) coding protein psRNATarget
XM_003532064.3
ncRNA:24   UUAGGCAUUCAUAUUAAAUUUGUA   1
  =||*||*|||||||||||||||||
targets:1645   GAUACGAAAGUAUAAUUUAAACAU   1668

1.0 PREDICTED: Glycine max actin-related protein 2/3 complex subunit 1B-like (LOC100778212), transcript variant X1, mRNA actin-related protein 2/3 complex subunit 1B-like(LOC100778212) coding protein psRNATarget
XM_014779393.1
ncRNA:24   UUAGGCAUUCAUAUUAAAUUUGUA   1
  =||*||*|||||||||||||||||
targets:3377   GAUACGAAAGUAUAAUUUAAACAU   3400

1.0 PREDICTED: Glycine max actin-related protein 2/3 complex subunit 1B-like (LOC100778212), transcript variant X3, mRNA actin-related protein 2/3 complex subunit 1B-like(LOC100778212) coding protein psRNATarget