ncRNA ID | novel_gma_miR8684 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr1:11777785-11777894 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 24 |
Mature sequence(if miRNA) | 87 - AUUGGACGUUGACCGUCAUGUGUC - 110 |
Stem-loop(if miRNA) |
--      C    A    C       ----------A  ----  UUUAUUGAAGGUUAAAG   AUUGGA GUUG CCGU AUGUGUC           CG    AU                 U   |||||| |||| |||| |||||||           ||    ||   UAACCU CAAC GGUA UGUACAG           CC    AU                 A AA      U    C    A       CGUACAAAAAA  UACA  UAAAACACAUGGAUUUA |
Stem-loop sequence | AUUGGACGUUGACCGUCAUGUGUCACGAUUUUAUUGAAGGUUAAAGUAAUUUAGGUACACAAAAUUAACAUCCAAAAAACAUGCGACAUGUAAUGGCCAACUUCCAAUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003545763.3 |
|
2.0 | PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like (LOC100810110), transcript variant X1, mRNA | pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like(LOC100810110) | coding protein | psRNATarget | |||||||||
XM_006598012.2 |
|
2.0 | PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like (LOC100810110), transcript variant X2, mRNA | pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like(LOC100810110) | coding protein | psRNATarget |