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BaseInfo

ncRNA ID novel_gma_miR8684
Species Glycine max
Class miRNA
Genome position Chr1:11777785-11777894 [-]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 87 - AUUGGACGUUGACCGUCAUGUGUC - 110
Stem-loop(if miRNA) --      C    A    C       ----------A  ----  UUUAUUGAAGGUUAAAG
  AUUGGA GUUG CCGU AUGUGUC           CG    AU                 U
  |||||| |||| |||| |||||||           ||    ||
  UAACCU CAAC GGUA UGUACAG           CC    AU                 A
AA      U    C    A       CGUACAAAAAA  UACA  UAAAACACAUGGAUUUA
Stem-loop sequence AUUGGACGUUGACCGUCAUGUGUCACGAUUUUAUUGAAGGUUAAAGUAAUUUAGGUACACAAAAUUAACAUCCAAAAAACAUGCGACAUGUAAUGGCCAACUUCCAAUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003545763.3
ncRNA:24   CUGUGUACUGCCAGUUGCAGGUUA   1
  |||||=||=|||||||||||||||
targets:333   GACACGUGGCGGUCAACGUCCAAU   356

2.0 PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like (LOC100810110), transcript variant X1, mRNA pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like(LOC100810110) coding protein psRNATarget
XM_006598012.2
ncRNA:24   CUGUGUACUGCCAGUUGCAGGUUA   1
  |||||=||=|||||||||||||||
targets:262   GACACGUGGCGGUCAACGUCCAAU   285

2.0 PREDICTED: Glycine max pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like (LOC100810110), transcript variant X2, mRNA pentatricopeptide repeat-containing protein At1g09220, mitochondrial-like(LOC100810110) coding protein psRNATarget