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BaseInfo

ncRNA ID novel_gma_miR8681
Species Glycine max
Class miRNA
Genome position Chr18:36276174-36276382 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 186 - UUAGAAUGAACAUGUGUAACGAUC - 209
Stem-loop(if miRNA) --UCCC    G             C  C                  C                   A A        C  GC A       U          CA
      UACA AUGUUCAUUCUAA CC AAUUGUGAUAAACUCAUC CUUACCUCUAAGCGGGCUC C UGUGUAGU UG  A UGAUAGC GCGUCUCUAG  G
      |||| ||||||||||||| || |||||||||||||||||| ||||||||||||||||||| | |||||||| ||  | ||||||| ||||||||||  U
      AUGU UACAAGUAAGAUU GG UUAAUGCUAUUUGAGUAG GAAUGGAGAUUCGCUCGAG G ACACAUCA GC  U ACUGUCG CGCAGAGAUC  U
CUAGCA    G             U  U                  A                   A C        A  UA C       C          CC
Stem-loop sequence UCCCUACAGAUGUUCAUUCUAACCCCAAUUGUGAUAAACUCAUCCCUUACCUCUAAGCGGGCUCACAUGUGUAGUCUGGCAAUGAUAGCUGCGUCUCUAGCAGUUCCCUAGAGACGCCGCUGUCACUAUCGAACUACACACGAGAGCUCGCUUAGAGGUAAGAGAUGAGUUUAUCGUAAUUUGGUUUAGAAUGAACAUGUGUAACGAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014774655.1
ncRNA:24   CUAGCAAUGUGUACAAGUAAGAUU   1
  ||||**||||||*|||||||||||
targets:145   GAUCCCUACACACGUUCAUUCUAA   168

2.5 PREDICTED: Glycine max uncharacterized LOC100798161 (LOC100798161), transcript variant X3, mRNA uncharacterized LOC100798161(LOC100798161) coding protein psRNATarget