ncRNA ID | novel_gma_miR8681 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:36276174-36276382 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1451621 |
Length | 24 |
Mature sequence(if miRNA) | 186 - UUAGAAUGAACAUGUGUAACGAUC - 209 |
Stem-loop(if miRNA) |
--UCCC    G             C  C                  C                   A A        C  GC A       U          CA       UACA AUGUUCAUUCUAA CC AAUUGUGAUAAACUCAUC CUUACCUCUAAGCGGGCUC C UGUGUAGU UG  A UGAUAGC GCGUCUCUAG  G       |||| ||||||||||||| || |||||||||||||||||| ||||||||||||||||||| | |||||||| ||  | ||||||| ||||||||||  U       AUGU UACAAGUAAGAUU GG UUAAUGCUAUUUGAGUAG GAAUGGAGAUUCGCUCGAG G ACACAUCA GC  U ACUGUCG CGCAGAGAUC  U CUAGCA    G             U  U                  A                   A C        A  UA C       C          CC |
Stem-loop sequence | UCCCUACAGAUGUUCAUUCUAACCCCAAUUGUGAUAAACUCAUCCCUUACCUCUAAGCGGGCUCACAUGUGUAGUCUGGCAAUGAUAGCUGCGUCUCUAGCAGUUCCCUAGAGACGCCGCUGUCACUAUCGAACUACACACGAGAGCUCGCUUAGAGGUAAGAGAUGAGUUUAUCGUAAUUUGGUUUAGAAUGAACAUGUGUAACGAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014774655.1 |
|
2.5 | PREDICTED: Glycine max uncharacterized LOC100798161 (LOC100798161), transcript variant X3, mRNA | uncharacterized LOC100798161(LOC100798161) | coding protein | psRNATarget |