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BaseInfo

ncRNA ID	novel_gma_miR8680
Species	Glycine max
Class	miRNA
Genome position	Chr1:12620569-12620650 [-]
Reference genome	Glycine_max_v2.0
Source	SRR1451621
Length	21
Mature sequence(if miRNA)	62 - AACCGAUGUAGAAUGUUAACC - 82
Stem-loop(if miRNA)	--   C             AAC               ACGU   AAC GAUGUAGAAUGUU   CAUUCUAAGACGGUC    G   ||| |||||||||||||   |||||||||||||||   UUG CUACAUCUUACAA   GUAAGAUUCUGCCAG    U UC   A             GUA               AAAC
Stem-loop sequence	AACCGAUGUAGAAUGUUAACCAUUCUAAGACGGUCACGUGUCAAAGACCGUCUUAGAAUGAUGAACAUUCUACAUCAGUUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006598094.2	ncRNA:21   CCAAUUGUAAGAUGUAGCCAA   1   ||*|||||||||||||||||* targets:973   GGAUAACAUUCUACAUCGGUC   993 Target Full Sequence	2.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X20, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768221.1	ncRNA:21   CCAAUUGUAAGAUGUAGCCAA   1   ||*|||||||||||||||||* targets:1086   GGAUAACAUUCUACAUCGGUC   1106 Target Full Sequence	2.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X21, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768217.1	ncRNA:21   CCAAUUGUAAGAUGUAGCCAA   1   ||*|||||||||||||||||* targets:1246   GGAUAACAUUCUACAUCGGUC   1266 Target Full Sequence	2.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X9, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768216.1	ncRNA:21   CCAAUUGUAAGAUGUAGCCAA   1   ||*|||||||||||||||||* targets:1523   GGAUAACAUUCUACAUCGGUC   1543 Target Full Sequence	2.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X8, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768212.1	ncRNA:21   CCAAUUGUAAGAUGUAGCCAA   1   ||*|||||||||||||||||* targets:1686   GGAUAACAUUCUACAUCGGUC   1706 Target Full Sequence	2.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X1, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_006598094.2	ncRNA:21   CCAAUUGUAAGAUGUAGCCAA   1   |**||=||||||||||||||* targets:931   GCAUAGCAUUCUACAUCGGUC   951 Target Full Sequence	3.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X20, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768221.1	ncRNA:21   CCAAUUGUAAGAUGUAGCCAA   1   |**||=||||||||||||||* targets:1044   GCAUAGCAUUCUACAUCGGUC   1064 Target Full Sequence	3.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X21, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768217.1	ncRNA:21   CCAAUUGUAAGAUGUAGCCAA   1   |**||=||||||||||||||* targets:1204   GCAUAGCAUUCUACAUCGGUC   1224 Target Full Sequence	3.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X9, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768216.1	ncRNA:21   CCAAUUGUAAGAUGUAGCCAA   1   |**||=||||||||||||||* targets:1481   GCAUAGCAUUCUACAUCGGUC   1501 Target Full Sequence	3.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X8, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget
XM_014768212.1	ncRNA:21   CCAAUUGUAAGAUGUAGCCAA   1   |**||=||||||||||||||* targets:1644   GCAUAGCAUUCUACAUCGGUC   1664 Target Full Sequence	3.0	PREDICTED: Glycine max nuclear pore complex protein GP210-like (LOC100812621), transcript variant X1, mRNA	nuclear pore complex protein GP210-like(LOC100812621)	coding protein	psRNATarget