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BaseInfo

ncRNA ID novel_gma_miR8679
Species Glycine max
Class miRNA
Genome position Chr18:4156863-4156921 [+]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 36 - GAAAUACAUAUAUACUUUUGGACU - 59
Stem-loop(if miRNA) --  UG   U            - -    A
  UC  AAA UAUAUAUGUAUU C UGAA U
  ||  ||| |||||||||||| | |||| A
  AG  UUU AUAUAUACAUAA G AUUU G
UC  GU   C            A U    U
Stem-loop sequence UCUGAAAUUAUAUAUGUAUUCUGAAAUAGUUUUAUGAAAUACAUAUAUACUUUUGGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003544475.3
ncRNA:24   UCAGGUUUUCAUAUAUACAUAAAG   1
  *|*|=||||||||||||*|||||*
targets:1913   CGGCUAAAAGUAUAUAUAUAUUUG   1936

2.5 PREDICTED: Glycine max uncharacterized LOC100814552 (LOC100814552), mRNA uncharacterized LOC100814552(LOC100814552) coding protein psRNATarget
XM_003553802.3
ncRNA:24   UCAGGUUUUCAUAUAUACAUAAAG   1
  |***||||||||||*||||||||*
targets:1278   AAAACAAAAGUAUAGAUGUAUUUA   1301

2.5 PREDICTED: Glycine max 2-methylene-furan-3-one reductase-like (LOC100791274), mRNA 2-methylene-furan-3-one reductase-like(LOC100791274) coding protein psRNATarget