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BaseInfo

ncRNA ID novel_gma_miR8674
Species Glycine max
Class miRNA
Genome position Chr19:34701110-34701181 [-]
Reference genome Glycine_max_v2.0
Source SRR1294476
Length 24
Mature sequence(if miRNA) 49 - CAAGAGACAAUGAAAUGUAGAGCU - 72
Stem-loop(if miRNA) ---C   -      U        GA    -   A   U
    AAG AGACAA GAAAUGUA  GCUU CAU UGC U
    ||| |||||| ||||||||  |||| ||| ||| G
    UUC UCUGUU CUUUAUAU  UGAA GUA AUG A
GGGU   A      U        --    U   C   A
Stem-loop sequence CAAGAGACAAUGAAAUGUAGAGCUUCAUAUGCUUGAAGUACAUGUAAGUUAUAUUUCUUUGUCUACUUUGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001289289.1
ncRNA:24   UCGAGAUGUAAAGUAACAGAGAAC   1
  |||*=|=|||||||||*|||||||
targets:1068   AGCGUUGCAUUUCAUUCUCUCUUG   1091

2.5 Glycine max F-box/kelch-repeat protein At1g57790-like (LOC100796538), mRNA F-box/kelch-repeat protein At1g57790-like(LOC100796538) coding protein psRNATarget
BT094450.1
ncRNA:24   UCGAGAUGUAAAGUAACAGAGAAC   1
  |||*=|=|||||||||*|||||||
targets:1069   AGCGUUGCAUUUCAUUCUCUCUUG   1092

2.5 Soybean clone JCVI-FLGm-24H16 unknown mRNA NA coding protein psRNATarget
XM_006598756.2
ncRNA:24   UCGAGAUGUAAAGUAACAGAGAAC   1
  **=*=|=||||||*||||||||||
targets:162   UAUGUUGCAUUUCUUUGUCUCUUG   185

2.5 PREDICTED: Glycine max putative disease resistance protein At4g11170 (LOC100778934), transcript variant X2, mRNA putative disease resistance protein At4g11170(LOC100778934) coding protein psRNATarget
XM_006598755.2
ncRNA:24   UCGAGAUGUAAAGUAACAGAGAAC   1
  **=*=|=||||||*||||||||||
targets:233   UAUGUUGCAUUUCUUUGUCUCUUG   256

2.5 PREDICTED: Glycine max putative disease resistance protein At4g11170 (LOC100778934), transcript variant X1, mRNA putative disease resistance protein At4g11170(LOC100778934) coding protein psRNATarget