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BaseInfo

ncRNA ID novel_gma_miR8636
Species Glycine max
Class miRNA
Genome position Chr1:30922363-30922459 [-]
Reference genome Glycine_max_v2.0
Source SRR1451621
Length 24
Mature sequence(if miRNA) 1 - AGCUAAUAACCGUCUUUGAAUGUU - 24
Stem-loop(if miRNA) --                           CA              C UC
  CAUUCAAAGACGGUUAUUAGCUAAUAA  GUCUUUGAAUGUUG G  U
  |||||||||||||||||||||||||||  |||||||||||||| |
  GUAAGUUUCUGCCAAUAAUCGAUUAUU  CAGAAACUUACAGC C  U
UU                           AG              - UC
Stem-loop sequence CAUUCAAAGACGGUUAUUAGCUAAUAACAGUCUUUGAAUGUUGCGUCUUCUCCGACAUUCAAAGACGAUUAUUAGCUAAUAACCGUCUUUGAAUGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775607.1
ncRNA:24   UUGUAAGUUUCUGCCAAUAAUCGA   1
  |=|||||||||=||||||||||||
targets:1652   AGCAUUCAAAGGCGGUUAUUAGCU   1675

1.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:24   UUGUAAGUUUCUGCCAAUAAUCGA   1
  |||||||||||||||||||||*||
targets:1487   AACAUUCAAAGACGGUUAUUAACU   1510

1.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget
XM_014775607.1
ncRNA:24   UUGUAAGUUUCUGCCAAUAAUCGA   1
  |||||||||||||||||||||*||
targets:1542   AACAUUCAAAGACGGUUAUUAACU   1565

1.5 PREDICTED: Glycine max protein MOR1 (LOC102659664), transcript variant X1, mRNA protein MOR1(LOC102659664) coding protein psRNATarget